Bhaduri Aparna, Neumann Elizabeth K, Kriegstein Arnold R, Sweedler Jonathan V
Department of Neurology, University of California, San Francisco, San Francisco, California 94143, United States.
The Eli and Edythe Broad Center of Regeneration Medicine and Stem Cell Research, University of California, San Francisco, San Francisco, California 94143, United States.
JACS Au. 2021 Nov 11;1(12):2261-2270. doi: 10.1021/jacsau.1c00393. eCollection 2021 Dec 27.
The lipidome is currently understudied but fundamental to life. Within the brain, little is known about cell-type lipid heterogeneity, and even less is known about cell-to-cell lipid diversity because it is difficult to study the lipids within individual cells. Here, we used single-cell mass spectrometry-based protocols to profile the lipidomes of 154 910 single cells across ten individuals consisting of five developmental ages and five brain regions, resulting in a unique lipid atlas available via a web browser of the developing human brain. From these data, we identify differentially expressed lipids across brain structures, cortical areas, and developmental ages. We inferred lipid profiles of several major cell types from this data set and additionally detected putative cell-type specific lipids. This data set will enable further interrogation of the developing human brain lipidome.
脂质组目前研究不足,但对生命至关重要。在大脑中,关于细胞类型的脂质异质性知之甚少,而关于细胞间脂质多样性的了解更少,因为研究单个细胞内的脂质很困难。在这里,我们使用基于单细胞质谱的方法,对来自五个发育年龄和五个脑区的十名个体的154910个单细胞的脂质组进行了分析,从而通过发育中的人类大脑的网络浏览器提供了一个独特的脂质图谱。从这些数据中,我们识别出跨脑结构、皮质区域和发育年龄差异表达的脂质。我们从该数据集中推断出几种主要细胞类型的脂质谱,并额外检测到推定的细胞类型特异性脂质。该数据集将有助于进一步探究发育中的人类大脑脂质组。