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在脂肪酶表面进行的极性取代极大地提高了其在有机溶剂中的耐受性。

Polar Substitutions on the Surface of a Lipase Substantially Improve Tolerance in Organic Solvents.

机构信息

Institute of Biotechnology, RWTH Aachen University, Worringerweg 3, Aachen, 52074, Germany.

DWI-Leibniz Institute for Interactive Materials, Forckenbeckstraße 50, Aachen, 52074, Germany.

出版信息

ChemSusChem. 2022 May 6;15(9):e202102551. doi: 10.1002/cssc.202102551. Epub 2022 Feb 9.

Abstract

Biocatalysis in organic solvents (OSs) enables more efficient routes to the synthesis of various valuable chemicals. However, OSs often reduce enzymatic activity, which limits the use of enzymes in OSs. Herein, we report a comprehensive understanding of interactions between surface polar substitutions and DMSO by integrating molecular dynamics (MD) simulations of 45 variants from Bacillus subtilis lipase A (BSLA) and substitution landscape into a "BSLA-SSM" library. By systematically analyzing 39 structural-, solvation-, and interaction energy-based observables, we discovered that hydration shell maintenance, DMSO reduction, and decreased local flexibility simultaneously govern the stability of polar variants in OS. Moreover, the fingerprints of 1631 polar-related variants in three OSs demonstrated that substituting aromatic to polar amino acid(s) hold great potential to highly improve OSs resistance. Hence, surface polar engineering is a powerful strategy to generate OS-tolerant lipases and other enzymes, thereby adapting the catalyst to the desired reaction and process with OSs.

摘要

有机溶剂(OSs)中的生物催化能够更有效地合成各种有价值的化学品。然而,OSs 常常降低酶的活性,从而限制了酶在 OSs 中的应用。在此,我们通过整合枯草芽孢杆菌脂肪酶 A(BSLA)45 种变体的分子动力学(MD)模拟和取代景观的“BSLA-SSM”库,全面了解表面极性取代基与 DMSO 之间的相互作用。通过系统分析 39 种基于结构、溶剂化和相互作用能的可观测变量,我们发现水合壳的维持、DMSO 的减少以及局部灵活性的降低共同控制了极性变体在 OS 中的稳定性。此外,三种 OS 中 1631 个与极性相关的变体指纹表明,将芳香族氨基酸取代为极性氨基酸具有极大的潜力来显著提高 OS 抗性。因此,表面极性工程是一种生成耐 OS 脂肪酶和其他酶的强大策略,从而使催化剂适应 OS 进行所需的反应和工艺。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/244a/9305861/c19ccb67c95a/CSSC-15-0-g002.jpg

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