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伊朗急性胃肠炎儿科患者中人类柯萨病毒的高病毒载量检测

High viral load detection of human Cosavirus in Iranian pediatric patients with acute gastroenteritis.

作者信息

Khoshbazan Sadaf, Ivani Zahra, Mousavi Nasab Seyed Dawood, Ahmadi Nayebali, Parhiz Aynaz, Khalesi Bahman, Firouzjani Mohammad Hassan, Ghaderi Mostafa, Barati Maryam, Ehsani Ardakani Mohammad Javad

机构信息

Department of Microbiology, Karaj Branch, Islamic Azad University, Karaj, Iran.

Department of Animal Viral Vaccine, Razi Vaccine and Serum Research Institute (RVSRI), Agricultural Research, Education and Extension Organization (AREEO) Karaj, Iran.

出版信息

Gastroenterol Hepatol Bed Bench. 2021 Fall;14(Suppl1):S82-S86.

PMID:35154606
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8817751/
Abstract

AIM

The present study implemented an RT-qPCR assay for the detection and quantification of human cosavirus in stool specimens from pediatric patients involved in acute gastroenteritis.

BACKGROUND

Human cosavirus is a newly recognized virus that seems to be partly related to acute gastroenteritis in pediatric patients. However, the relationship between human cosavirus and diseases in humans is unclear.

METHODS

From January 2018 to December 2019, a total of 160 stool samples were collected from pediatric patients presenting with acute gastroenteritis in a hospital in Karaj, Iran. After viral RNA extraction, RT-qPCR was performed to amplify the 5'UTR region of the human cosavirus genome and viral load was analyzed.

RESULTS

The human cosavirus genomic RNA was detected in 4/160 (2.5%) stool samples tested. The maximum viral load was determined to be 4.6×10 copies/ml in one sample obtained from a 4-year-old patient.

CONCLUSION

The human cosavirus as a new member of the Picornaviridae family was illustrated in fecal samples from pediatric patients with acute gastroenteritis in Iran. This is the first documentation of human cosavirus circulation in Iranian children.

摘要

目的

本研究采用逆转录定量聚合酶链反应(RT-qPCR)检测方法,对参与急性胃肠炎的儿科患者粪便标本中的人杯状病毒进行检测和定量分析。

背景

人杯状病毒是一种新发现的病毒,似乎与儿科患者的急性胃肠炎有一定关联。然而,人杯状病毒与人类疾病之间的关系尚不清楚。

方法

2018年1月至2019年12月,从伊朗卡拉季一家医院的急性胃肠炎儿科患者中总共收集了160份粪便样本。提取病毒RNA后,进行RT-qPCR以扩增人杯状病毒基因组的5'非翻译区(5'UTR),并分析病毒载量。

结果

在检测的160份粪便样本中,有4份(2.5%)检测到了人杯状病毒基因组RNA。从一名4岁患者获得的一份样本中,确定最大病毒载量为4.6×10拷贝/毫升。

结论

人杯状病毒作为小RNA病毒科的一个新成员,在伊朗急性胃肠炎儿科患者的粪便样本中得到证实。这是伊朗儿童中人杯状病毒传播的首次记录。

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本文引用的文献

1
High Frequency of Aichivirus in Children With Acute Gastroenteritis in Iran.伊朗急性胃肠炎患儿中 Aichivirus 的高频率。
Pediatr Infect Dis J. 2020 Jul;39(7):576-579. doi: 10.1097/INF.0000000000002638.
2
First Occurrence of Saffold Virus in Sewage and River Water Samples in Karaj, Iran.伊朗卡拉季市污水和河水样本中首次检出萨福病毒。
Food Environ Virol. 2020 Mar;12(1):75-80. doi: 10.1007/s12560-019-09415-y. Epub 2019 Nov 15.
3
Iterative Excretion of Human Cosaviruses from Different Genotypes Associated with Combined Immunodeficiency Disorder.不同基因型人类冠状病毒的反复排泄与联合免疫缺陷病有关。
Intervirology. 2018;61(5):247-254. doi: 10.1159/000495182. Epub 2019 Feb 6.
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Occurrence and Genetic Diversity of Human Cosavirus in Sewage in Italy.意大利污水中人杯状病毒的发生和遗传多样性。
Food Environ Virol. 2018 Dec;10(4):386-390. doi: 10.1007/s12560-018-9356-2. Epub 2018 Aug 30.
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Prevalence of human Cosavirus and Saffold virus in young children with gastroenteritis in Northern Italy.意大利北部胃肠炎幼儿中人冠状病毒和萨福病毒的流行情况。
Minerva Pediatr (Torino). 2023 Jun;75(3):376-380. doi: 10.23736/S2724-5276.18.05219-2. Epub 2018 Jul 18.
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Prevalence of human cosavirus and saffold virus with an emergence of saffold virus genotype 6 in patients hospitalized with acute gastroenteritis in Chiang Mai, Thailand, 2014-2016.2014 - 2016年泰国清迈急性胃肠炎住院患者中人类科萨病毒和萨福尔德病毒的流行情况及萨福尔德病毒6型的出现
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7
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