Huang Zhihong, Liu Xinkui, Wu Chao, Lu Shan, Antony Stalin, Zhou Wei, Zhang Jingyuan, Wu Zhishan, Tan Yingying, Fan Xiaotian, You Leiming, Jing Zhiwei, Wu Jiarui
Department of Clinical Pharmacology of Traditional Chinese Medicine, School of Chinese Materia Medica, Beijing University of Chinese Medicine, Beijing, China.
Institute of Fundamental and Frontier Sciences, University of Electronic Science and Technology of China, Chengdu, China.
Front Oncol. 2022 Jan 27;11:802727. doi: 10.3389/fonc.2021.802727. eCollection 2021.
Stomach adenocarcinoma (STAD) is one of the most malignant cancers that endanger human health. There is growing evidence that competitive endogenous RNA (ceRNA) regulatory networks play an important role in various human tumors. However, the complexity and behavioral characteristics of the ceRNA network in STAD are still unclear. In this study, we constructed a ceRNA regulatory network to identify the potential prognostic biomarkers associated with STAD. The expression profile of lncRNA, miRNA, and mRNA was downloaded from The Cancer Genome Atlas (TCGA). After performing bioinformatics analysis, the CCDC144NL-AS1/hsa-miR-145-5p/SERPINE1 ceRNA network associated to STAD prognosis of STAD was obtained. The CCDC144NL-AS1/SERPINE1 axis in the ceRNA network was identified by correlation analysis and considered as a clinical prognosis model by Cox regression analysis. In addition, methylation analysis indicated that the abnormal upregulation of CCDC144NL-AS1/SERPINE1 axis might be related to the aberrant methylation of some sites, and immune infiltration analysis suggested that CCDC144NL-AS1/SERPINE1 axis probably influences the alteration of tumor immune microenvironment and the occurrence and development of STAD. In particular, the CCDC144NL-AS1/SERPINE1 axis based on the ceRNA network constructed in the present study might be an important novel factor correlating with the diagnosis and prognosis of STAD.
胃腺癌(STAD)是危害人类健康的最恶性肿瘤之一。越来越多的证据表明,竞争性内源性RNA(ceRNA)调控网络在各种人类肿瘤中发挥着重要作用。然而,STAD中ceRNA网络的复杂性和行为特征仍不清楚。在本研究中,我们构建了一个ceRNA调控网络,以识别与STAD相关的潜在预后生物标志物。从癌症基因组图谱(TCGA)下载lncRNA、miRNA和mRNA的表达谱。经过生物信息学分析,获得了与STAD预后相关的CCDC144NL-AS1/hsa-miR-145-5p/SERPINE1 ceRNA网络。通过相关性分析确定了ceRNA网络中的CCDC144NL-AS1/SERPINE1轴,并通过Cox回归分析将其视为临床预后模型。此外,甲基化分析表明CCDC144NL-AS1/SERPINE1轴的异常上调可能与某些位点的异常甲基化有关,免疫浸润分析表明CCDC144NL-AS1/SERPINE1轴可能影响肿瘤免疫微环境的改变以及STAD的发生发展。特别是,基于本研究构建的ceRNA网络的CCDC144NL-AS1/SERPINE1轴可能是与STAD诊断和预后相关的重要新因素。