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比较转录组分析鉴定了公鹅外生殖器发育过程中下丘脑-垂体-性腺轴中的关键候选基因和途径。

Comparative transcriptome analysis identifies crucial candidate genes and pathways in the hypothalamic-pituitary-gonadal axis during external genitalia development of male geese.

机构信息

Farm Animal Genetic Resources Exploration and Innovation Key Laboratory of Sichuan Province, Chengdu Campus, Sichuan Agricultural University, Wenjiang District, Chengdu, 611130, Sichuan, China.

出版信息

BMC Genomics. 2022 Feb 15;23(1):136. doi: 10.1186/s12864-022-08374-2.

Abstract

BACKGROUND

All birds reproduce via internal fertilization, but only ~3% of male birds possess the external genitalia that allows for intromission. Waterfowl (e.g., duck and goose) are representatives of them, and the external genitalia development of male geese is directly related to mating ability. Notably, some male geese show abnormal external genitalia development during ontogenesis. However, until now little is known about the molecular mechanisms of the external genitalia development in goose. In the present study, comparative transcriptomic analyses were performed on the hypothalamus, pituitary gland, testis, and external genitalia isolated from the 245-day-old male Tianfu meat geese showing normal (NEGG, n = 3) and abnormal (AEGG, n = 3) external genitals in order to provide a better understanding of the mechanisms controlling the development of the external genitalia in aquatic bird species.

RESULTS

There were 107, 284, 2192, and 1005 differentially expressed genes (DEGs) identified in the hypothalamus, pituitary gland, testis and external genitalia between NEGG and AEGG. Functional enrichment analysis indicated that the DEGs identified in the hypothalamus were mainly enriched in the ECM-receptor interaction pathway. The ECM-receptor interaction, focal adhesion, and neuroactive ligand-receptor interaction pathways were significantly enriched by the DEGs in the pituitary gland. In the testis, the DEGs were enriched in the neuroactive ligand-receptor interaction, cell cycle, oocyte meiosis, and purine metabolism. In the external genitalia, the DEGs were enriched in the metabolic, neuroactive ligand-receptor interaction, and WNT signaling pathways. Furthermore, through integrated analysis of protein-protein interaction (PPI) network and co-expression network, fifteen genes involved in the neuroactive ligand-receptor interaction and WNT signaling pathways were identified, including KNG1, LPAR2, LPAR3, NPY, PLCB1, AVPR1B, GHSR, GRM3, HTR5A, FSHB, FSHR, WNT11, WNT5A, WIF1, and WNT7B, which could play crucial roles in the development of goose external genitalia.

CONCLUSIONS

This study is the first systematically comparing the hypothalamus, pituitary gland, testis, and external genitalia transcriptomes of male geese exhibiting normal and abnormal external genitals. Both bioinformatic analysis and validation experiments indicated that the neuroactive ligand-receptor interaction pathway could regulate the WNT signaling pathway through PLCB1 to control male goose external genitalia development.

摘要

背景

所有鸟类通过体内受精繁殖,但只有约 3%的雄性鸟类拥有允许交配的外部生殖器。水禽(如鸭和鹅)就是它们的代表,而雄性鹅的外部生殖器发育直接关系到交配能力。值得注意的是,一些雄性鹅在个体发生过程中表现出外部生殖器发育异常。然而,到目前为止,人们对鹅的外部生殖器发育的分子机制知之甚少。本研究对 245 日龄表现出正常(NEGG,n=3)和异常(AEGG,n=3)外部生殖器的天府肉鹅的下丘脑、垂体、睾丸和外部生殖器进行了比较转录组分析,以期更好地了解控制水禽物种外部生殖器发育的机制。

结果

在 NEGG 和 AEGG 之间,在下丘脑、垂体、睾丸和外部生殖器中分别鉴定出 107、284、2192 和 1005 个差异表达基因(DEGs)。功能富集分析表明,在下丘脑鉴定出的 DEGs 主要富集在 ECM-受体相互作用途径中。垂体中 DEGs 显著富集在 ECM-受体相互作用、焦点粘附和神经活性配体-受体相互作用途径中。在睾丸中,DEGs 富集在神经活性配体-受体相互作用、细胞周期、卵母细胞减数分裂和嘌呤代谢中。在外生殖器中,DEGs 富集在代谢、神经活性配体-受体相互作用和 WNT 信号通路中。此外,通过蛋白质-蛋白质相互作用(PPI)网络和共表达网络的综合分析,鉴定出 15 个参与神经活性配体-受体相互作用和 WNT 信号通路的基因,包括 KNG1、LPAR2、LPAR3、NPY、PLCB1、AVPR1B、GHSR、GRM3、HTR5A、FSHB、FSHR、WNT11、WNT5A、WIF1 和 WNT7B,它们可能在鹅的外部生殖器发育中发挥关键作用。

结论

本研究首次系统比较了表现出正常和异常外部生殖器的雄性鹅的下丘脑、垂体、睾丸和外部生殖器的转录组。生物信息学分析和验证实验均表明,神经活性配体-受体相互作用途径可通过 PLCB1 调节 WNT 信号通路,从而控制雄性鹅的外部生殖器发育。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/70c9/8848681/175564d6d4a4/12864_2022_8374_Fig1_HTML.jpg

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