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豌豆(L.)三个重组自交系群体的综合连锁图谱。

An Integrated Linkage Map of Three Recombinant Inbred Populations of Pea ( L.).

机构信息

John Innes Centre, Norwich Research Park, Colney Lane, Norwich NR4 7UH, UK.

Institute of Biological, Environmental and Rural Sciences, Aberystwyth University, Plas Gogerddan, Aberystwyth SY23 3EB, UK.

出版信息

Genes (Basel). 2022 Jan 22;13(2):196. doi: 10.3390/genes13020196.

DOI:10.3390/genes13020196
PMID:35205241
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8871737/
Abstract

Biparental recombinant inbred line (RIL) populations are sets of genetically stable lines and have a simple population structure that facilitates the dissection of the genetics of interesting traits. On the other hand, populations derived from multiparent intercrosses combine both greater diversity and higher numbers of recombination events than RILs. Here, we describe a simple population structure: a three-way recombinant inbred population combination. This structure was easy to produce and was a compromise between biparental and multiparent populations. We show that this structure had advantages when analyzing cultivar crosses, and could achieve a mapping resolution of a few genes.

摘要

双亲重组近交系(RIL)群体是一组遗传稳定的品系,具有简单的群体结构,便于对有趣性状的遗传进行剖析。另一方面,由多亲杂交产生的群体结合了比 RIL 更高的多样性和更多的重组事件。在这里,我们描述了一种简单的群体结构:三向重组近交群体组合。这种结构易于产生,是双亲与多亲群体之间的折衷。我们表明,这种结构在分析品种杂交时具有优势,并且可以达到几个基因的作图分辨率。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24fb/8871737/2a351f8269cd/genes-13-00196-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24fb/8871737/bfe8fafcf57b/genes-13-00196-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24fb/8871737/032ad3b1385a/genes-13-00196-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24fb/8871737/3df8ea8f63a8/genes-13-00196-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24fb/8871737/df90c414277d/genes-13-00196-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24fb/8871737/705fc7ebc142/genes-13-00196-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24fb/8871737/2a351f8269cd/genes-13-00196-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24fb/8871737/bfe8fafcf57b/genes-13-00196-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24fb/8871737/032ad3b1385a/genes-13-00196-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24fb/8871737/3df8ea8f63a8/genes-13-00196-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24fb/8871737/df90c414277d/genes-13-00196-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24fb/8871737/705fc7ebc142/genes-13-00196-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24fb/8871737/2a351f8269cd/genes-13-00196-g006.jpg

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本文引用的文献

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A reference genome for pea provides insight into legume genome evolution.豌豆参考基因组揭示豆科基因组进化。
Nat Genet. 2019 Sep;51(9):1411-1422. doi: 10.1038/s41588-019-0480-1. Epub 2019 Sep 2.
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Development of two major resources for pea genomics: the GenoPea 13.2K SNP Array and a high-density, high-resolution consensus genetic map.豌豆基因组学两大资源的开发:GenoPea 13.2K单核苷酸多态性阵列和高密度、高分辨率的整合遗传图谱。
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Genetic control of flowering time in legumes.豆科植物开花时间的遗传控制。
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Mol Cytogenet. 2011 Apr 8;4:10. doi: 10.1186/1755-8166-4-10.
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Identification of Mendel's white flower character.孟德尔白花性状的鉴定。
PLoS One. 2010 Oct 11;5(10):e13230. doi: 10.1371/journal.pone.0013230.
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THREaD Mapper Studio: a novel, visual web server for the estimation of genetic linkage maps.THREaD Mapper Studio:一个新颖的、可视化的网络服务器,用于估计遗传连锁图谱。
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Update on the genetic control of flowering in garden pea.豌豆开花遗传控制的最新进展。
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Efficient and accurate construction of genetic linkage maps from the minimum spanning tree of a graph.基于图的最小生成树高效准确地构建遗传连锁图谱。
PLoS Genet. 2008 Oct;4(10):e1000212. doi: 10.1371/journal.pgen.1000212. Epub 2008 Oct 10.
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The relationship between genetic and cytogenetic maps of pea. I. Standard and translocation karyotypes.豌豆的遗传和细胞遗传学图谱之间的关系。I. 标准和易位核型。
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