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构建无细胞表达系统以降低成本。

Constructing Cell-Free Expression Systems for Low-Cost Access.

机构信息

Department of Plant Sciences, University of Cambridge, CB2 3EA Cambridge, U.K.

ANID - Millennium Institute for Integrative Biology (iBio), FONDAP Center for Genome Regulation, Institute for Biological and Medical Engineering, Schools of Engineering, Medicine and Biological Sciences, Pontificia Universidad Católica de Chile, Santiago 8330005, Chile.

出版信息

ACS Synth Biol. 2022 Mar 18;11(3):1114-1128. doi: 10.1021/acssynbio.1c00342. Epub 2022 Mar 8.

DOI:10.1021/acssynbio.1c00342
PMID:35259873
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9098194/
Abstract

Cell-free systems for gene expression have gained attention as platforms for the facile study of genetic circuits and as highly effective tools for teaching. Despite recent progress, the technology remains inaccessible for many in low- and middle-income countries due to the expensive reagents required for its manufacturing, as well as specialized equipment required for distribution and storage. To address these challenges, we deconstructed processes required for cell-free mixture preparation and developed a set of alternative low-cost strategies for easy production and sharing of extracts. First, we explored the stability of cell-free reactions dried through a low-cost device based on silica beads, as an alternative to commercial automated freeze dryers. Second, we report the positive effect of lactose as an additive for increasing protein synthesis in maltodextrin-based cell-free reactions using either circular or linear DNA templates. The modifications were used to produce active amounts of two high-value reagents: the isothermal polymerase and the restriction enzyme I. Third, we demonstrated the endogenous regeneration of nucleoside triphosphates and synthesis of pyruvate in cell-free systems (CFSs) based on phosphoenol pyruvate (PEP) and maltodextrin (MDX). We exploited this novel finding to demonstrate the use of a cell-free mixture completely free of any exogenous nucleotide triphosphates (NTPs) to generate high yields of sfGFP expression. Together, these modifications can produce desiccated extracts that are 203-424-fold cheaper than commercial versions. These improvements will facilitate wider use of CFS for research and education purposes.

摘要

无细胞体系作为基因表达的平台,因其易于研究遗传回路而备受关注,同时也是教学的高效工具。尽管最近取得了进展,但由于其制造所需的昂贵试剂以及分配和储存所需的专用设备,该技术对于低收入和中等收入国家的许多人来说仍然难以企及。为了解决这些挑战,我们对无细胞混合物制备过程进行了解构,并开发了一系列替代的低成本策略,以方便提取物的生产和共享。首先,我们探索了基于硅胶珠的低成本设备干燥无细胞反应的稳定性,作为商业自动化冷冻干燥器的替代方法。其次,我们报告了乳糖作为添加剂的积极作用,它可以提高基于麦芽糊精的无细胞反应中使用圆形或线性 DNA 模板的蛋白质合成。这些改进用于生产两种高价值试剂的有效量:等温聚合酶和限制酶 I。第三,我们证明了无细胞体系(CFS)中核苷三磷酸的内源性再生和基于磷酸烯醇丙酮酸(PEP)和麦芽糊精(MDX)的丙酮酸合成。我们利用这一新发现证明了在完全不含任何外源核苷三磷酸(NTP)的无细胞混合物中使用,以产生高产量的 sfGFP 表达。这些改进可以生产出比商业版本便宜 203-424 倍的干燥提取物。这些改进将促进 CFS 在研究和教育目的中的更广泛应用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bce9/9098194/d5e2eab9c0c7/sb1c00342_0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bce9/9098194/5e8b5085866b/sb1c00342_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bce9/9098194/d2451a297ef7/sb1c00342_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bce9/9098194/a68e0933935c/sb1c00342_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bce9/9098194/da2e86639803/sb1c00342_0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bce9/9098194/d5e2eab9c0c7/sb1c00342_0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bce9/9098194/5e8b5085866b/sb1c00342_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bce9/9098194/d2451a297ef7/sb1c00342_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bce9/9098194/a68e0933935c/sb1c00342_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bce9/9098194/da2e86639803/sb1c00342_0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bce9/9098194/d5e2eab9c0c7/sb1c00342_0007.jpg

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