• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

颗粒觅食策略促进海洋环境中的微生物多样性。

Particle foraging strategies promote microbial diversity in marine environments.

机构信息

Ralph M. Parsons Laboratory for Environmental Science and Engineering, Department of Civil and Environmental Engineering, Massachusetts Institute of Technology, Cambridge, United States.

Physics of Living Systems, Department of Physics, Massachusetts Institute of Technology, Cambridge, United States.

出版信息

Elife. 2022 Mar 15;11:e73948. doi: 10.7554/eLife.73948.

DOI:10.7554/eLife.73948
PMID:35289269
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8956285/
Abstract

Microbial foraging in patchy environments, where resources are fragmented into particles or pockets embedded in a large matrix, plays a key role in natural environments. In the oceans and freshwater systems, particle-associated bacteria can interact with particle surfaces in different ways: some colonize only during short transients, while others form long-lived, stable colonies. We do not yet understand the ecological mechanisms by which both short- and long-term colonizers can coexist. Here, we address this problem with a mathematical model that explains how marine populations with different detachment rates from particles can stably coexist. In our model, populations grow only while on particles, but also face the increased risk of mortality by predation and sinking. Key to coexistence is the idea that detachment from particles modulates both net growth and mortality, but in opposite directions, creating a trade-off between them. While slow-detaching populations show the highest growth return (i.e., produce more net offspring), they are more susceptible to suffer higher rates of mortality than fast-detaching populations. Surprisingly, fluctuating environments, manifesting as blooms of particles (favoring growth) and predators (favoring mortality) significantly expand the likelihood that populations with different detachment rates can coexist. Our study shows how the spatial ecology of microbes in the ocean can lead to a predictable diversification of foraging strategies and the coexistence of multiple taxa on a single growth-limiting resource.

摘要

在斑块环境中,微生物觅食起着关键作用,其中资源被破碎成颗粒或口袋状嵌入在大基质中。在海洋和淡水系统中,与颗粒相关的细菌可以以不同的方式与颗粒表面相互作用:一些只在短暂的瞬间定植,而另一些则形成长期稳定的菌落。我们还不了解短期和长期定植者能够共存的生态机制。在这里,我们通过一个数学模型来解决这个问题,该模型解释了具有不同从颗粒上脱落率的海洋种群如何能够稳定共存。在我们的模型中,种群只有在颗粒上时才会生长,但也面临着捕食和下沉导致的死亡率增加的风险。共存的关键是这样一个想法,即从颗粒上的脱落既调节净增长又调节死亡率,但方向相反,在它们之间形成了一种权衡。虽然脱落缓慢的种群表现出最高的生长回报(即产生更多的净后代),但它们比脱落快的种群更容易遭受更高的死亡率。令人惊讶的是,波动的环境,表现为颗粒(有利于生长)和捕食者(有利于死亡率)的爆发,大大增加了具有不同脱落率的种群能够共存的可能性。我们的研究表明,海洋中微生物的空间生态学如何导致觅食策略的可预测多样化,以及在单一生长限制资源上多种分类群的共存。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c736/8956285/2a0c0e61527e/elife-73948-fig4-figsupp2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c736/8956285/ad29154a67d9/elife-73948-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c736/8956285/fa36b2add095/elife-73948-fig1-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c736/8956285/6e075752cd14/elife-73948-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c736/8956285/1d754ec9ea77/elife-73948-fig2-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c736/8956285/d3b7bf10a909/elife-73948-fig2-figsupp2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c736/8956285/fcb99ff3bcb7/elife-73948-fig2-figsupp3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c736/8956285/1f49f7c127b9/elife-73948-fig2-figsupp4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c736/8956285/e865da932505/elife-73948-fig2-figsupp5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c736/8956285/9067e59c6236/elife-73948-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c736/8956285/a4948f38699a/elife-73948-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c736/8956285/aad1d6f2088a/elife-73948-fig4-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c736/8956285/2a0c0e61527e/elife-73948-fig4-figsupp2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c736/8956285/ad29154a67d9/elife-73948-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c736/8956285/fa36b2add095/elife-73948-fig1-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c736/8956285/6e075752cd14/elife-73948-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c736/8956285/1d754ec9ea77/elife-73948-fig2-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c736/8956285/d3b7bf10a909/elife-73948-fig2-figsupp2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c736/8956285/fcb99ff3bcb7/elife-73948-fig2-figsupp3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c736/8956285/1f49f7c127b9/elife-73948-fig2-figsupp4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c736/8956285/e865da932505/elife-73948-fig2-figsupp5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c736/8956285/9067e59c6236/elife-73948-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c736/8956285/a4948f38699a/elife-73948-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c736/8956285/aad1d6f2088a/elife-73948-fig4-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c736/8956285/2a0c0e61527e/elife-73948-fig4-figsupp2.jpg

相似文献

1
Particle foraging strategies promote microbial diversity in marine environments.颗粒觅食策略促进海洋环境中的微生物多样性。
Elife. 2022 Mar 15;11:e73948. doi: 10.7554/eLife.73948.
2
How optimally foraging predators promote prey coexistence in a variable environment.最优觅食的捕食者如何在多变环境中促进猎物共存。
Theor Popul Biol. 2017 Apr;114:40-58. doi: 10.1016/j.tpb.2016.12.003. Epub 2016 Dec 18.
3
Comparative analysis of Japanese three-spined stickleback clades reveals the Pacific Ocean lineage has adapted to freshwater environments while the Japan Sea has not.对日本三刺鱼进化枝的比较分析表明,太平洋谱系已适应淡水环境,而日本海谱系则没有。
PLoS One. 2014 Dec 2;9(12):e112404. doi: 10.1371/journal.pone.0112404. eCollection 2014.
4
The Minderoo-Monaco Commission on Plastics and Human Health.美诺集团-摩纳哥基金会塑料与人体健康委员会
Ann Glob Health. 2023 Mar 21;89(1):23. doi: 10.5334/aogh.4056. eCollection 2023.
5
Coexistence of competitors in marine metacommunities: environmental variability, edge effects, and the dispersal niche.海洋后生群落中竞争者的共存:环境变异性、边缘效应和扩散生态位。
Ecology. 2014 Aug;95(8):2289-302. doi: 10.1890/13-0472.1.
6
The Foraging Ecology of the Endangered Cape Verde Shearwater, a Sentinel Species for Marine Conservation off West Africa.濒危佛得角鹱的觅食生态,西非沿海海洋保护的哨兵物种
PLoS One. 2015 Oct 5;10(10):e0139390. doi: 10.1371/journal.pone.0139390. eCollection 2015.
7
Ecology and physics of bacterial chemotaxis in the ocean.海洋中细菌趋化作用的生态学和物理学。
Microbiol Mol Biol Rev. 2012 Dec;76(4):792-812. doi: 10.1128/MMBR.00029-12.
8
Central-place foraging and ecological effects of an invasive predator across multiple habitats.跨多种生境的入侵捕食者的中心地觅食和生态影响。
Ecology. 2016 Oct;97(10):2729-2739. doi: 10.1002/ecy.1477. Epub 2016 Sep 1.
9
Toward a trophic theory of species diversity.迈向物种多样性的营养理论。
Proc Natl Acad Sci U S A. 2015 Sep 15;112(37):11415-22. doi: 10.1073/pnas.1501070112.
10
Resource Patchiness as a Resolution to the Food Paradox in the Sea.资源斑块性是解决海洋食物悖论的关键。
Am Nat. 2024 Jan;203(1):1-13. doi: 10.1086/727473. Epub 2023 Nov 8.

引用本文的文献

1
Interactions at sea: on the microbiome life-cycle and biogeochemical processes.海洋中的相互作用:关于微生物群落的生命周期和生物地球化学过程
Hist Philos Life Sci. 2025 Aug 18;47(3):41. doi: 10.1007/s40656-025-00687-1.
2
Macroecological patterns in experimental microbial communities.实验性微生物群落中的宏观生态模式。
PLoS Comput Biol. 2025 May 8;21(5):e1013044. doi: 10.1371/journal.pcbi.1013044. eCollection 2025 May.
3
Paradox of the Sub-Plankton: Plausible Mechanisms and Open Problems Underlying Strain-Level Diversity in Microbial Communities.

本文引用的文献

1
Turnover in Life-Strategies Recapitulates Marine Microbial Succession Colonizing Model Particles.生命策略中的周转概括了定殖于模型颗粒上的海洋微生物演替过程。
Front Microbiol. 2022 Jun 23;13:812116. doi: 10.3389/fmicb.2022.812116. eCollection 2022.
2
Resource-diversity relationships in bacterial communities reflect the network structure of microbial metabolism.细菌群落中的资源多样性关系反映了微生物代谢的网络结构。
Nat Ecol Evol. 2021 Oct;5(10):1424-1434. doi: 10.1038/s41559-021-01535-8. Epub 2021 Aug 19.
3
Constrained optimal foraging by marine bacterioplankton on particulate organic matter.
亚浮游生物的悖论:微生物群落中菌株水平多样性背后的合理机制与开放问题
Environ Microbiol. 2025 Apr;27(4):e70094. doi: 10.1111/1462-2920.70094.
4
Slower swimming promotes chemotactic encounters between bacteria and small phytoplankton.较慢的游动速度促进了细菌与小型浮游植物之间的趋化相遇。
Proc Natl Acad Sci U S A. 2025 Jan 14;122(2):e2411074122. doi: 10.1073/pnas.2411074122. Epub 2025 Jan 10.
5
Spatial clustering of hosts can favor specialist parasites.宿主的空间聚集有利于专性寄生虫。
Ecol Evol. 2024 Nov 17;14(11):e70273. doi: 10.1002/ece3.70273. eCollection 2024 Nov.
6
Interplay between particle size and microbial ecology in the gut microbiome.肠道微生物组中颗粒大小与微生物生态学的相互作用。
ISME J. 2024 Jan 8;18(1). doi: 10.1093/ismejo/wrae168.
7
Interplay between particle size and microbial ecology in the gut microbiome.肠道微生物群中颗粒大小与微生物生态之间的相互作用。
bioRxiv. 2024 Apr 27:2024.04.26.591376. doi: 10.1101/2024.04.26.591376.
8
Phase Transition to Chaos in Complex Ecosystems with Nonreciprocal Species-Resource Interactions.具有非互惠物种 - 资源相互作用的复杂生态系统中的混沌相变
Phys Rev Lett. 2024 Mar 22;132(12):127401. doi: 10.1103/PhysRevLett.132.127401.
9
The active free-living bathypelagic microbiome is largely dominated by rare surface taxa.活跃的自由生活深海微生物群落主要由稀有的表层类群主导。
ISME Commun. 2024 Jan 23;4(1):ycae015. doi: 10.1093/ismeco/ycae015. eCollection 2024 Jan.
10
Phase transition to chaos in complex ecosystems with non-reciprocal species-resource interactions.具有非互惠物种 - 资源相互作用的复杂生态系统中向混沌的相变
ArXiv. 2024 Feb 27:arXiv:2308.15757v2.
海洋细菌对颗粒有机物的约束最优觅食。
Proc Natl Acad Sci U S A. 2020 Oct 13;117(41):25571-25579. doi: 10.1073/pnas.2012443117. Epub 2020 Sep 24.
4
Cooperation and spatial self-organization determine rate and efficiency of particulate organic matter degradation in marine bacteria.合作和空间自组织决定了海洋细菌中颗粒有机物降解的速度和效率。
Proc Natl Acad Sci U S A. 2019 Nov 12;116(46):23309-23316. doi: 10.1073/pnas.1908512116. Epub 2019 Oct 30.
5
Genomic and Seasonal Variations among Aquatic Phages Infecting the Baltic Sea Gammaproteobacterium sp. Strain BAL341.感染波罗的海γ-变形菌 BAL341 的水生噬菌体的基因组和季节性变化。
Appl Environ Microbiol. 2019 Aug 29;85(18). doi: 10.1128/AEM.01003-19. Print 2019 Sep 15.
6
Biological composition and microbial dynamics of sinking particulate organic matter at abyssal depths in the oligotrophic open ocean.寡营养开阔大洋深渊下沉颗粒有机物质的生物组成和微生物动态。
Proc Natl Acad Sci U S A. 2019 Jun 11;116(24):11824-11832. doi: 10.1073/pnas.1903080116. Epub 2019 May 24.
7
Resource heterogeneity structures aquatic bacterial communities.资源异质性构建水生细菌群落。
ISME J. 2019 Sep;13(9):2183-2195. doi: 10.1038/s41396-019-0427-7. Epub 2019 May 3.
8
Why microbes secrete molecules to modify their environment: the case of iron-chelating siderophores.微生物为何分泌分子来改变其环境:以铁螯合载体为例。
J R Soc Interface. 2019 Jan 31;16(150):20180674. doi: 10.1098/rsif.2018.0674.
9
A Foraging Mandala for Aquatic Microorganisms.水生微生物觅食曼荼罗。
ISME J. 2019 Mar;13(3):563-575. doi: 10.1038/s41396-018-0309-4. Epub 2018 Nov 16.
10
The North Sea goes viral: Occurrence and distribution of North Sea bacteriophages.北海病毒传播:北海噬菌体的出现与分布
Mar Genomics. 2018 Oct;41:31-41. doi: 10.1016/j.margen.2018.05.004. Epub 2018 Jun 1.