• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

从中国杭州一名患者胆汁中分离出的一株罕见产色素约翰逊不动杆菌的全基因组序列

Complete Genome Sequence of a Rare Pigment-Producing Strain of Acinetobacter johnsonii, Isolated from the Bile of a Patient in Hangzhou, China.

作者信息

Mu Xinli, Liu Haiyang, Yao Yue, Zhao Feng, Fang Youhong, Yu Yunsong, Hua Xiaoting

机构信息

Department of Infectious Diseases, Sir Run Run Shaw Hospital, Zhejiang University School of Medicine, Hangzhou, Zhejiang, China.

Key Laboratory of Microbial Technology and Bioinformatics of Zhejiang Province, Hangzhou, Zhejiang, China.

出版信息

Microbiol Resour Announc. 2022 Apr 21;11(4):e0002522. doi: 10.1128/mra.00025-22. Epub 2022 Apr 4.

DOI:10.1128/mra.00025-22
PMID:35377178
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9022562/
Abstract

Here, we report the complete genome sequence of a rare pigment-producing strain of Acinetobacter johnsonii. The genome consists of a 3,360,823-bp circular chromosome (G+C content, 41.56%) and an 8,887-bp plasmid (G+C content, 33.71%). It possesses 3,038 coding gene sequences, 19 rRNA genes, 87 tRNA genes, and 4 noncoding RNA (ncRNA) genes.

摘要

在此,我们报告了一株罕见的产色素约翰逊不动杆菌的全基因组序列。该基因组由一条3360823 bp的环状染色体(G+C含量为41.56%)和一个8887 bp的质粒(G+C含量为33.71%)组成。它拥有3038个编码基因序列、19个rRNA基因、87个tRNA基因和4个非编码RNA(ncRNA)基因。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2edc/9022562/1b406e844b46/mra.00025-22-f001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2edc/9022562/1b406e844b46/mra.00025-22-f001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2edc/9022562/1b406e844b46/mra.00025-22-f001.jpg

相似文献

1
Complete Genome Sequence of a Rare Pigment-Producing Strain of Acinetobacter johnsonii, Isolated from the Bile of a Patient in Hangzhou, China.从中国杭州一名患者胆汁中分离出的一株罕见产色素约翰逊不动杆菌的全基因组序列
Microbiol Resour Announc. 2022 Apr 21;11(4):e0002522. doi: 10.1128/mra.00025-22. Epub 2022 Apr 4.
2
Complete genome sequence of probiotic 7409N31 isolated from a healthy Hanwoo calf.从健康韩牛犊牛分离的益生菌7409N31的全基因组序列
J Anim Sci Technol. 2023 Jul;65(4):890-893. doi: 10.5187/jast.2022.e98. Epub 2023 Jul 30.
3
Complete genome sequence of the cyprodinil-degrading bacterium Acinetobacter johnsonii LXL_C1.降解嘧菌环胺的约翰逊不动杆菌LXL_C1的全基因组序列
Microb Pathog. 2019 Feb;127:246-249. doi: 10.1016/j.micpath.2018.11.016. Epub 2018 Nov 26.
4
Reconstruction of Acinetobacter johnsonii ICE_NC genome using hybrid de novo genome assemblies and identification of the 12α-hydroxysteroid dehydrogenase gene.利用混合从头基因组组装重建约翰逊不动杆菌 ICE_NC 基因组,并鉴定 12α-羟类固醇脱氢酶基因。
J Appl Microbiol. 2022 Sep;133(3):1506-1519. doi: 10.1111/jam.15657. Epub 2022 Jun 22.
5
Whole-Genome Analysis of Two Copies of Gene Carrying Strain Acsw19 Isolated from Sichuan, China.从中国四川分离出的携带两个基因拷贝的菌株Acsw19的全基因组分析。
Infect Drug Resist. 2020 Mar 23;13:855-865. doi: 10.2147/IDR.S236200. eCollection 2020.
6
Complete Genome Sequencing and Comparative Genome Characterization of ZLJ010, a Potential Probiotic With Health-Promoting Properties.具有促进健康特性的潜在益生菌ZLJ010的全基因组测序及比较基因组特征分析
Front Genet. 2019 Sep 10;10:812. doi: 10.3389/fgene.2019.00812. eCollection 2019.
7
Complete genome sequence data of strain GSE09, a volatile-producing biocontrol bacterium isolated from cucumber () root.从黄瓜()根部分离得到的挥发性生防细菌GSE09菌株的全基因组序列数据。
Data Brief. 2019 Jul 15;25:104270. doi: 10.1016/j.dib.2019.104270. eCollection 2019 Aug.
8
Complete genome sequence and phylogenetic analysis of nosocomial pathogen Acinetobacter nosocomialis strain NCTC 8102.医院感染病原菌洋葱伯克霍尔德菌 NCTC 8102 全基因组序列及系统发育分析。
Genes Genomics. 2019 Sep;41(9):1063-1075. doi: 10.1007/s13258-019-00834-6. Epub 2019 Jun 8.
9
Complete Genome Sequence of Yellow Pigment-Producing sp. Strain HAL-16.产黄色素sp.菌株HAL-16的全基因组序列
Microbiol Resour Announc. 2020 Oct 8;9(41):e00985-20. doi: 10.1128/MRA.00985-20.
10
Complete genome sequence of strain XH2169.菌株XH2169的全基因组序列
Microbiol Resour Announc. 2024 Sep 10;13(9):e0005224. doi: 10.1128/mra.00052-24. Epub 2024 Aug 20.

引用本文的文献

1
Case report: Emerging species in post-traumatic endophthalmitis: .病例报告:创伤后眼内炎中的新出现物种:
Front Med (Lausanne). 2024 Aug 13;11:1406277. doi: 10.3389/fmed.2024.1406277. eCollection 2024.

本文引用的文献

1
Time- and memory-efficient genome assembly with Raven.使用Raven进行高效省时的基因组组装。
Nat Comput Sci. 2021 May;1(5):332-336. doi: 10.1038/s43588-021-00073-4. Epub 2021 May 20.
2
Phenotype profiles and adaptive preference of Acinetobacter johnsonii isolated from Ba River with different environmental backgrounds.从具有不同环境背景的灞河分离出的约翰逊不动杆菌的表型特征及适应性偏好
Environ Res. 2021 May;196:110913. doi: 10.1016/j.envres.2021.110913. Epub 2021 Feb 24.
3
Complete genome sequence of the cyprodinil-degrading bacterium Acinetobacter johnsonii LXL_C1.
降解嘧菌环胺的约翰逊不动杆菌LXL_C1的全基因组序列
Microb Pathog. 2019 Feb;127:246-249. doi: 10.1016/j.micpath.2018.11.016. Epub 2018 Nov 26.
4
VFDB 2019: a comparative pathogenomic platform with an interactive web interface.VFDB 2019:一个具有交互式网络界面的比较病原体基因组学平台。
Nucleic Acids Res. 2019 Jan 8;47(D1):D687-D692. doi: 10.1093/nar/gky1080.
5
Draft Genome Sequence of C6, an Environmental Isolate Engaging in Interspecific Metabolic Interactions.C6的基因组序列草图,C6是一种参与种间代谢相互作用的环境分离株。
Genome Announc. 2017 Apr 20;5(16):e00155-17. doi: 10.1128/genomeA.00155-17.
6
NCBI prokaryotic genome annotation pipeline.美国国立生物技术信息中心原核生物基因组注释管道
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
7
Draft Genome Sequence of Acinetobacter johnsonii MB44, Exhibiting Nematicidal Activity against Caenorhabditis elegans.约翰逊不动杆菌MB44的基因组序列草图,该菌株对线虫秀丽隐杆线虫具有杀线虫活性。
Genome Announc. 2016 Feb 18;4(1):e01772-15. doi: 10.1128/genomeA.01772-15.
8
Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement.Pilon:一种用于全面微生物变异检测和基因组组装改进的集成工具。
PLoS One. 2014 Nov 19;9(11):e112963. doi: 10.1371/journal.pone.0112963. eCollection 2014.
9
Trimmomatic: a flexible trimmer for Illumina sequence data.Trimmomatic:一款适用于 Illumina 测序数据的灵活修剪工具。
Bioinformatics. 2014 Aug 1;30(15):2114-20. doi: 10.1093/bioinformatics/btu170. Epub 2014 Apr 1.
10
Identification of acquired antimicrobial resistance genes.获得性抗菌耐药基因的鉴定。
J Antimicrob Chemother. 2012 Nov;67(11):2640-4. doi: 10.1093/jac/dks261. Epub 2012 Jul 10.