Genomics Research Center, Academia Sinica, Taipei, Taiwan.
Department of Biomedical Imaging and Radiological Sciences, National Yang Ming Chiao Tung University, Taipei, Taiwan.
Aging (Albany NY). 2022 Apr 11;14(7):3233-3258. doi: 10.18632/aging.204010.
Metabolic reprogramming and elevated glycolysis levels are associated with tumor progression. However, despite cancer cells selectively inhibiting or expressing certain metabolic enzymes, it is unclear whether differences in gene profiles influence patient outcomes. Therefore, identifying the differences in enzyme action may facilitate discovery of gene ontology variations to characterize tumors. Fructose-1,6-bisphosphate (F-1,6-BP) is an important intermediate in glucose metabolism, particularly in cancer. Gluconeogenesis and glycolysis require fructose-1,6-bisphosphonates 1 (FBP1) and fructose-bisphosphate aldolase A (ALDOA), which participate in F-1,6-BP conversion. Increased expression of ALDOA and decreased expression of FBP1 are associated with the progression of various forms of cancer in humans. However, the exact molecular mechanism by which ALDOA and FBP1 are involved in the switching of F-1,6-BP is not yet known. As a result of their pancancer pattern, the relationship between ALDOA and FBP1 in patient prognosis is reversed, particularly in lung adenocarcinoma (LUAD) and liver hepatocellular carcinoma (LIHC). Using The Cancer Genome Atlas (TCGA), we observed that FBP1 expression was low in patients with LUAD and LIHC tumors, which was distinct from ALDOA. A similar trend was observed in the analysis of Cancer Cell Line Encyclopedia (CCLE) datasets. By dissecting downstream networks and possible upstream regulators, using ALDOA and FBP1 as the core, we identified common signatures and interaction events regulated by ALDOA and FBP1. Notably, the identified effectors dominated by ALDOA or FBP1 were distributed in opposite patterns and can be considered independent prognostic indicators for patients with LUAD and LIHC. Therefore, uncovering the effectors between ALDOA and FBP1 will lead to novel therapeutic strategies for cancer patients.
代谢重编程和糖酵解水平升高与肿瘤进展有关。然而,尽管癌细胞选择性地抑制或表达某些代谢酶,但基因谱的差异是否影响患者的预后尚不清楚。因此,确定酶作用的差异可能有助于发现基因本体变化以表征肿瘤。1,6-二磷酸果糖 (F-1,6-BP) 是葡萄糖代谢中的一种重要中间产物,特别是在癌症中。糖异生和糖酵解需要 1,6-二磷酸果糖 1 (FBP1) 和果糖二磷酸醛缩酶 A (ALDOA),它们参与 F-1,6-BP 的转化。ALDOA 表达增加和 FBP1 表达降低与人类各种形式的癌症进展有关。然而,ALDOA 和 FBP1 参与 F-1,6-BP 转换的确切分子机制尚不清楚。由于它们具有泛癌模式,因此 ALDOA 和 FBP1 与患者预后的关系在肺腺癌 (LUAD) 和肝细胞癌 (LIHC) 中发生逆转。使用癌症基因组图谱 (TCGA),我们观察到 LUAD 和 LIHC 肿瘤患者的 FBP1 表达较低,这与 ALDOA 不同。在对癌症细胞系百科全书 (CCLE) 数据集的分析中也观察到了类似的趋势。通过剖析下游网络和可能的上游调节剂,以 ALDOA 和 FBP1 为核心,我们确定了由 ALDOA 和 FBP1 调节的常见特征和相互作用事件。值得注意的是,以 ALDOA 或 FBP1 为主导的鉴定效应物呈相反的分布模式,可以被认为是 LUAD 和 LIHC 患者的独立预后指标。因此,揭示 ALDOA 和 FBP1 之间的效应物将为癌症患者带来新的治疗策略。