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lncRNA-miRNA-mRNA相互作用组失调作为卵巢癌转移过程的标志物

Dysregulation of lncRNA-miRNA-mRNA Interactome as a Marker of Metastatic Process in Ovarian Cancer.

作者信息

Pronina Irina V, Uroshlev Leonid A, Moskovtsev Alexey A, Zaichenko Danila M, Filippova Elena A, Fridman Marina V, Burdennyy Alexey M, Loginov Vitaly I, Kazubskaya Tatiana P, Kushlinskii Nikolay E, Dmitriev Alexey A, Braga Eleonora A, Brovkina Olga I

机构信息

Institute of General Pathology and Pathophysiology, 125315 Moscow, Russia.

Vavilov Institute of General Genetics, Russian Academy of Sciences, 119991 Moscow, Russia.

出版信息

Biomedicines. 2022 Mar 31;10(4):824. doi: 10.3390/biomedicines10040824.

Abstract

Ovarian cancer (OC) is one of the most common types of cancer among malignancies of the female reproductive system. This pathology is asymptomatic until advanced stages and has a poor prognosis. Our study aimed to search for lncRNA-miRNA-mRNA competing triplets that promote ovarian tumorigenesis. For this purpose, we analyzed tumor samples from the TCGA database and verified the results experimentally in a set of 46 paired samples of tumor and matched histologically unchanged ovarian tissues from OC patients. The list of RNAs selected in silico for experimental studies included 13 mRNAs, 10 lncRNAs, and 5 miRNAs related to epithelial-mesenchymal transition and angiogenesis. We evaluated the expression of these RNAs by qRT-PCR and assessed the correlation between levels of miRNAs, mRNAs, and lncRNAs. Sixteen significant triplets were revealed, in some of which, e.g., OIP5-AS1-miR-203a-c-MET and OIP5-AS1-miR-203a-ZEB2, both lncRNA and mRNA had sites for miR-203a direct binding. Transfection of the OVCAR-3 and SKOV-3 cell lines with the miR-203a mimic was used to confirm the novel links of miR-203a with ZEB2 and c-MET in OC. These connections suggest that the interactomes have the potential for diagnostics of metastasis at early onset.

摘要

卵巢癌(OC)是女性生殖系统恶性肿瘤中最常见的癌症类型之一。这种病理状况在晚期之前没有症状,且预后较差。我们的研究旨在寻找促进卵巢肿瘤发生的lncRNA-miRNA-mRNA竞争性三联体。为此,我们分析了来自TCGA数据库的肿瘤样本,并在一组46对来自OC患者的肿瘤及组织学上未改变的配对卵巢组织样本中通过实验验证了结果。在计算机模拟中选择用于实验研究的RNA列表包括13种mRNA、10种lncRNA和5种与上皮-间质转化及血管生成相关的miRNA。我们通过qRT-PCR评估了这些RNA的表达,并评估了miRNA、mRNA和lncRNA水平之间的相关性。发现了16个显著的三联体,其中一些三联体,例如OIP5-AS1-miR-203a-c-MET和OIP5-AS1-miR-203a-ZEB2,lncRNA和mRNA都有miR-203a直接结合的位点。用miR-203a模拟物转染OVCAR-3和SKOV-3细胞系,以证实miR-203a与OC中ZEB2和c-MET的新联系。这些联系表明,相互作用组有在早期诊断转移的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dcd0/9031843/83e233f042f0/biomedicines-10-00824-g001.jpg

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