Wei Qiuhui, Liu Yuyang, Lan Kaer, Wei Xin, Hu Tianyuan, Chen Rong, Zhao Shujuan, Yin Xiaopu, Xie Tian
School of Pharmacy, Hangzhou Normal University, Hangzhou, China.
Key Laboratory of Elemene Class Anti-Cancer Chinese Medicines, Engineering Laboratory of Development and Application of Traditional Chinese Medicines, Collaborative Innovation Center of Traditional Chinese Medicines of Zhejiang Province, Hangzhou Normal University, Hangzhou, China.
Front Genet. 2022 Apr 25;13:894928. doi: 10.3389/fgene.2022.894928. eCollection 2022.
superfamily is one of the most abundant families in plants, and plays critical role in plant growth, development, metabolism regulation, and stress response. is the main source plant of three traditional Chinese medicines, which are widely used in clinical treatment due to its diverse pharmacological activities. In present study, 88 were identified and analyzed in , including 43 -related genes, 42 genes, two genes, and one gene. Forty-three MYB-related proteins were classified into several types based on conserved domains and specific motifs, including CCA1-like type, R-R type, Myb-CC type, GARP-like type, and TBR-like type. The analysis of motifs in MYB DBD and no-MYB regions revealed the relevance of protein structure and function. Comparative phylogeny analysis divided 42 R2R3-MYB proteins into 19 subgroups and provided a reference for understanding the functions of some CwMYBs based on orthologs of previously characterized MYBs. Expression profile analysis of genes revealed the differentially expressed genes responding to various abiotic stresses. Four candidate genes were identified by combining the results of phylogeny analysis and expression analysis. , , , and were significantly induced by cold, NaCl, and MeJA stress treatments. and were proved as regulators with activity of transcriptional activation, whereas and were not. They may participate in the response to abiotic stresses through different mechanisms in . This study was the first step toward understanding the family and the response to abiotic stresses in .
超家族是植物中最丰富的家族之一,在植物生长、发育、代谢调控和胁迫响应中发挥关键作用。它是三种传统中药的主要来源植物,因其多样的药理活性而被广泛用于临床治疗。在本研究中,在[具体植物名称]中鉴定并分析了88个[相关基因名称],包括43个与MYB相关的基因、42个R2R3-MYB基因、两个MYB-like基因和一个MYB-related基因。43个MYB相关蛋白根据保守结构域和特定基序被分为几种类型,包括CCA1-like类型、R-R类型、Myb-CC类型、GARP-like类型和TBR-like类型。对MYB DBD和非MYB区域基序的分析揭示了蛋白质结构与功能的相关性。比较系统发育分析将42个R2R3-MYB蛋白分为19个亚组,并基于先前已表征的MYB的直系同源物为理解一些CwMYBs的功能提供了参考。对[相关基因名称]基因的表达谱分析揭示了响应各种非生物胁迫的差异表达基因。通过结合系统发育分析和表达分析的结果鉴定出四个候选[相关基因名称]基因。[基因名称1]、[基因名称2]、[基因名称3]和[基因名称4]在冷、NaCl和茉莉酸甲酯胁迫处理下被显著诱导。[基因名称1]和[基因名称2]被证明具有转录激活活性的调节因子,而[基因名称3]和[基因名称4]则不是。它们可能通过不同机制参与[具体植物名称]对非生物胁迫的响应。本研究是了解[相关家族名称]家族以及[具体植物名称]对非生物胁迫响应的第一步。