Böddeker Thomas J, Rosowski Kathryn A, Berchtold Doris, Emmanouilidis Leonidas, Han Yaning, Allain Frédéric H T, Style Robert W, Pelkmans Lucas, Dufresne Eric R
Department of Materials, ETH Zurich, Zurich, Switzerland.
Department of Molecular Life Sciences, University of Zurich, Zurich, Switzerland.
Nat Phys. 2022;18(5):571-578. doi: 10.1038/s41567-022-01537-8. Epub 2022 Mar 24.
Many membraneless organelles are liquid-like domains that form inside the active, viscoelastic environment of living cells through phase separation. To investigate the potential coupling of phase separation with the cytoskeleton, we quantify the structural correlations of membraneless organelles (stress granules) and cytoskeletal filaments (microtubules) in a human-derived epithelial cell line. We find that microtubule networks are substantially denser in the vicinity of stress granules. When microtubules are depolymerized, the sub-units localize near the surface of the stress granules. We interpret these data using a thermodynamic model of partitioning of particles to the surface and bulk of the droplets. In this framework, our data are consistent with a weak (≲ ) affinity of the microtubule sub-units for stress granule interfaces. As microtubules polymerize, their interfacial affinity increases, providing sufficient adhesion to deform droplets and/or the network. Our work suggests that proteins and other objects in the cell have a non-specific affinity for droplet interfaces that increases with the contact area and becomes most apparent when they have no preference for the interior of a droplet over the rest of the cytoplasm. We validate this basic physical phenomenon in vitro through the interaction of a simple protein-RNA condensate with microtubules.
许多无膜细胞器是类液结构域,通过相分离在活细胞的活跃、粘弹性环境中形成。为了研究相分离与细胞骨架的潜在耦合,我们在一种人类来源的上皮细胞系中量化了无膜细胞器(应激颗粒)和细胞骨架丝(微管)的结构相关性。我们发现,在应激颗粒附近,微管网络明显更密集。当微管解聚时,亚基定位于应激颗粒表面附近。我们使用颗粒分配到液滴表面和主体的热力学模型来解释这些数据。在此框架下,我们的数据与微管亚基对应激颗粒界面的弱(≲ )亲和力一致。随着微管聚合,它们的界面亲和力增加,提供足够的附着力以使液滴和/或网络变形。我们的工作表明,细胞中的蛋白质和其他物质对应激颗粒界面具有非特异性亲和力,这种亲和力随接触面积增加而增加,并且当它们对液滴内部和细胞质其他部分没有偏好时最为明显。我们通过一种简单的蛋白质 - RNA凝聚物与微管的相互作用在体外验证了这一基本物理现象。