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不同生长阶段猪肠道微生物区系的动态分布:组成与贡献。

Dynamic Distribution of Gut Microbiota in Pigs at Different Growth Stages: Composition and Contribution.

机构信息

Key Laboratory for Animal Disease-Resistance Nutrition of Ministry of Education of China, Key Laboratory for Animal Disease-Resistance Nutrition and Feed of Ministry of Agriculture of China, Key Laboratory of Animal Disease-Resistant Nutrition of Sichuan Province, and Animal Nutrition Institute, Sichuan Agricultural Universitygrid.80510.3c, Chengdu, People's Republic of China.

DSM (China) Animal Nutrition Research Center Co., Ltd., Bazhou, People's Republic of China.

出版信息

Microbiol Spectr. 2022 Jun 29;10(3):e0068821. doi: 10.1128/spectrum.00688-21. Epub 2022 May 18.

Abstract

Fully understanding the dynamic distribution of the gut microbiota in pigs is essential, as gut microorganisms play a fundamental role in physiological processes, immunity, and the metabolism of nutrients by the host. Here, we first summarize the characteristics and the dynamic shifts in the gut microbial community of pigs at different ages based on the results of 63 peer-review publications. Then a meta-analysis based on the sequences from 16 studies with accession numbers in the GenBank database is conducted to verify the characteristics of the gut microbiota in healthy pigs. A dynamic shift is confirmed in the gut microbiota of pigs at different ages and growth phases. In general, , Escherichia, , , , and are dominant in piglets before weaning, then and shift to be the predominant genera with , , and as comparative minors in postweaned pigs. A number of 19 bacterial genera, including , , and can be found in more than 90% of pigs and three enterotypes can be identified in all pigs at different ages, suggesting there is a "core" microbiota in the gut of healthy pigs, which can be a potential target for nutrition or health regulation. The "core" members benefit the growth and gut health of the host. These findings help to define an "optimal" gut microbial profile for assessing, or improving, the performance and health status of pigs at different growth stages. The ban on feed antibiotics by more and more countries, and the expected ban on ZnO in feed supplementation from 2022 in the EU, urge researchers and pig producers to search for new alternatives. One possible alternative is to use the so-called "next-generation probiotics (NGPs)" derived from gastrointestinal tract. In this paper, we reveal that a total of 19 "core" bacterial genera including , , and etc., can be found in more than 90% of healthy pigs across different ages. These identified genera may probably be the potential candidates of NGPs or the potential target of microflora regulation. Adding substrates preferred by these target microbes will help to increase the abundance of specific symbiotic species and benefit the gut health of pigs. Further research targeting these "core" microbes and the dynamic distribution of microbiota, as well as the related function is of great importance in swine production.

摘要

充分了解猪肠道微生物群的动态分布至关重要,因为肠道微生物在生理过程、免疫和宿主对营养物质的代谢中起着基础性作用。在这里,我们首先根据 63 篇同行评议出版物的结果总结了不同年龄猪肠道微生物群落的特征和动态变化。然后,基于在 GenBank 数据库中具有访问号的 16 项研究的序列进行元分析,以验证健康猪肠道微生物群的特征。确认了不同年龄和生长阶段猪肠道微生物群的动态变化。一般来说,在断奶前仔猪中, 、 、 、 和 占优势,然后 和 转变为主要属, 、 和 作为比较次要的属。在断奶后的猪中,可以发现许多 19 个细菌属,包括 、 和 ,可以在超过 90%的猪中找到,并且可以在所有不同年龄的猪中鉴定出三种肠型,这表明健康猪的肠道中存在一个“核心”微生物群,这可能是营养或健康调节的潜在目标。“核心”成员有利于宿主的生长和肠道健康。这些发现有助于确定用于评估或改善不同生长阶段猪的性能和健康状况的“最佳”肠道微生物特征。越来越多的国家禁止在饲料中添加抗生素,以及欧盟预计从 2022 年起禁止在饲料中添加氧化锌,这促使研究人员和养猪户寻找新的替代品。一种可能的替代品是使用所谓的源自胃肠道的“下一代益生菌(NGPs)”。在本文中,我们揭示了在不同年龄的健康猪中,总共 19 个“核心”细菌属,包括 、 、 等,在超过 90%的猪中被发现。这些被鉴定的属可能是 NGPs 的潜在候选物或微生物群调节的潜在目标。添加这些目标微生物喜欢的基质将有助于增加特定共生物种的丰度,有利于猪的肠道健康。针对这些“核心”微生物和微生物区系的动态分布以及相关功能的进一步研究,在养猪生产中具有重要意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97f2/9241710/862dccda59cd/spectrum.00688-21-f001.jpg

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