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一群 BashTheBug 志愿者从 96 孔板肉汤微量稀释板的照片中可重复且准确地测量了 13 种抗结核药物的最小抑菌浓度。

A crowd of BashTheBug volunteers reproducibly and accurately measure the minimum inhibitory concentrations of 13 antitubercular drugs from photographs of 96-well broth microdilution plates.

机构信息

Nuffield Department of Medicine, University of Oxford, Oxford, United Kingdom.

Zooniverse, Department of Physics, University of Oxford, Oxford, United Kingdom.

出版信息

Elife. 2022 May 19;11:e75046. doi: 10.7554/eLife.75046.

Abstract

Tuberculosis is a respiratory disease that is treatable with antibiotics. An increasing prevalence of resistance means that to ensure a good treatment outcome it is desirable to test the susceptibility of each infection to different antibiotics. Conventionally, this is done by culturing a clinical sample and then exposing aliquots to a panel of antibiotics, each being present at a pre-determined concentration, thereby determining if the sample isresistant or susceptible to each sample. The minimum inhibitory concentration (MIC) of a drug is the lowestconcentration that inhibits growth and is a more useful quantity but requires each sample to be tested at a range ofconcentrations for each drug. Using 96-well broth micro dilution plates with each well containing a lyophilised pre-determined amount of an antibiotic is a convenient and cost-effective way to measure the MICs of several drugs at once for a clinical sample. Although accurate, this is still an expensive and slow process that requires highly-skilled and experienced laboratory scientists. Here we show that, through the BashTheBug project hosted on the Zooniverse citizen science platform, a crowd of volunteers can reproducibly and accurately determine the MICs for 13 drugs and that simply taking the median or mode of 11-17 independent classifications is sufficient. There is therefore a potential role for crowds to support (but not supplant) the role of experts in antibiotic susceptibility testing.

摘要

结核病是一种可通过抗生素治疗的呼吸道疾病。耐药性的日益普遍意味着,为了确保良好的治疗效果,有必要测试每种感染对不同抗生素的敏感性。传统上,这是通过培养临床样本,然后将样本暴露于抗生素组合中,每个样本的浓度预先确定,从而确定样本对每种样本的耐药性或敏感性。药物的最低抑菌浓度(MIC)是抑制生长的最低浓度,是一个更有用的量,但需要对每个样本进行一系列浓度的测试,以确定每种药物的 MIC。使用含有冻干抗生素预定量的 96 孔肉汤微稀释板是一种方便且具有成本效益的方法,可以一次性测量临床样本中几种药物的 MIC。虽然准确,但这仍然是一个昂贵且缓慢的过程,需要高技能和经验丰富的实验室科学家。在这里,我们通过 Zooniverse 公民科学平台上的 BashTheBug 项目展示,一群志愿者可以可重复且准确地确定 13 种药物的 MIC,只需取 11-17 个独立分类的中位数或模式即可。因此,志愿者有可能在抗生素药敏试验中支持(而非取代)专家的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/36cc/9286738/804b817e5bba/elife-75046-fig1.jpg

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