Suppr超能文献

7-甲基鸟苷对前列腺癌生化复发及肿瘤免疫微环境的特征分析

Characterization of 7-Methylguanosine Identified Biochemical Recurrence and Tumor Immune Microenvironment in Prostate Cancer.

作者信息

Xin Sheng, Deng Yuxuan, Mao Jiaquan, Wang Tao, Liu Jihong, Wang Shaogang, Song Xiaodong, Song Wen, Liu Xiaming

机构信息

Department of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science & Technology, Wuhan, China.

Institute of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science & Technology, Wuhan, China.

出版信息

Front Oncol. 2022 May 23;12:900203. doi: 10.3389/fonc.2022.900203. eCollection 2022.

Abstract

Prostate cancer (PCa) has a high incidence rate, mortality rate, and biochemical recurrence (BCR) rate. 7-Methylguanosine (m7G), as one of the RNA modifications, has been considered to be actively involved in cancer-related translation disorders in recent years. Therefore, we first used The Cancer Genome Atlas (TCGA) database to identify prognosis and m7G-related long non-coding RNAs (lncRNAs). Then we randomly divided the samples into the training set and test set and then constructed and verified the m7G lnRNA prognostic model (m7Gscore) by the least absolute shrinkage and selection operator (LASSO) regression analysis. The m7Gscore has been proved to be an independent marker of BCR-free survival in patients with PCa. Furthermore, the m7Gscore was significantly correlated with the tumor immune microenvironment (TIME) and somatic mutation of PCa patients and had the potential to be an indicator for the selection of drug treatment. We also clustered TCGA cohort into three m7G-related patterns (C1, C2, and C3). The Kaplan-Meier survival analysis revealed that C1 had the best BCR-free survival and C3 had the worst. The TIME was also significantly distinct among the three m7G-related patterns. According to the TIME characteristics of the patterns, we defined C1, C2, and C3 as immune-desert phenotype, immune-inflamed phenotype, and immune-excluded phenotype, respectively.

摘要

前列腺癌(PCa)具有较高的发病率、死亡率和生化复发(BCR)率。7-甲基鸟苷(m7G)作为RNA修饰之一,近年来被认为积极参与癌症相关的翻译紊乱。因此,我们首先使用癌症基因组图谱(TCGA)数据库来识别预后和与m7G相关的长链非编码RNA(lncRNAs)。然后我们将样本随机分为训练集和测试集,接着通过最小绝对收缩和选择算子(LASSO)回归分析构建并验证了m7G lncRNA预后模型(m7Gscore)。m7Gscore已被证明是PCa患者无BCR生存的独立标志物。此外,m7Gscore与PCa患者的肿瘤免疫微环境(TIME)和体细胞突变显著相关,并且有可能成为药物治疗选择的指标。我们还将TCGA队列聚类为三种与m7G相关的模式(C1、C2和C3)。Kaplan-Meier生存分析显示,C1的无BCR生存期最佳,C3最差。三种与m7G相关的模式之间的TIME也有显著差异。根据这些模式的TIME特征,我们分别将C1、C2和C3定义为免疫荒漠表型、免疫炎症表型和免疫排除表型。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a82f/9168541/cbe1a07ee059/fonc-12-900203-g001.jpg

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验