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黏膜微生物组学荟萃分析揭示了胃肿瘤发生过程中的普遍微生物特征和失调。

Meta-analysis of mucosal microbiota reveals universal microbial signatures and dysbiosis in gastric carcinogenesis.

机构信息

Institute of Digestive Disease and Department of Medicine and Therapeutics, State Key Laboratory of Digestive Disease, Li Ka Shing Institute of Health Sciences, CUHK Shenzhen Research Institute, The Chinese University of Hong Kong, Hong Kong, SAR, China.

Lee Kong Chian School of Medicine, Nanyang Technological University, Singapore, Singapore.

出版信息

Oncogene. 2022 Jul;41(28):3599-3610. doi: 10.1038/s41388-022-02377-9. Epub 2022 Jun 9.

Abstract

The consistency of the associations between gastric mucosal microbiome and gastric cancer across studies remained unexamined. We aimed to identify universal microbial signatures in gastric carcinogenesis through a meta-analysis of gastric microbiome from multiple studies. Compositional and ecological profiles of gastric microbes across stages of gastric carcinogenesis were significantly altered. Meta-analysis revealed that opportunistic pathobionts Fusobacterium, Parvimonas, Veillonella, Prevotella and Peptostreptococcus were enriched in GC, while commensals Bifidobacterium, Bacillus and Blautia were depleted in comparison to SG. The co-occurring correlation strengths of GC-enriched bacteria were increased along disease progression while those of GC-depleted bacteria were decreased. Eight bacterial taxa, including Veillonella, Dialister, Granulicatella, Herbaspirillum, Comamonas, Chryseobacterium, Shewanella and Helicobacter, were newly identified by this study as universal biomarkers for robustly discriminating GC from SG, with an area under the curve (AUC) of 0.85. Moreover, H. pylori-positive samples exhibited reduced microbial diversity, altered microbiota community and weaker interactions among gastric microbes. Our meta-analysis demonstrated comprehensive and generalizable gastric mucosa microbial features associated with histological stages of gastric carcinogenesis, including GC associated bacteria, diagnostic biomarkers, bacterial network alteration and H. pylori influence.

摘要

我们旨在通过对来自多个研究的胃微生物组进行荟萃分析,确定胃癌发生过程中的普遍微生物特征。胃癌发生过程中胃微生物的组成和生态特征发生了显著改变。荟萃分析显示,机会性病原体梭菌、小单胞菌、韦荣球菌、普雷沃氏菌和消化链球菌在 GC 中丰富,而双歧杆菌、芽孢杆菌和布劳特氏菌等共生菌则在 GC 中减少。与疾病进展相比,GC 富集细菌的共同相关强度增加,而 GC 消耗细菌的共同相关强度降低。通过这项研究,还新鉴定了 8 个细菌分类群,包括韦荣球菌、小韦荣球菌、颗粒链球菌、希瓦氏菌、食酸菌、黄杆菌、洋葱伯克霍尔德菌和幽门螺杆菌,作为从 SG 中可靠地区分 GC 的通用生物标志物,曲线下面积(AUC)为 0.85。此外,H. pylori 阳性样本表现出微生物多样性降低、微生物群落改变以及胃微生物之间相互作用减弱。我们的荟萃分析表明,与胃癌发生的组织学阶段相关的胃黏膜微生物具有全面和可推广的特征,包括与 GC 相关的细菌、诊断生物标志物、细菌网络改变和 H. pylori 的影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e597/9270228/28526e69aa60/41388_2022_2377_Fig1_HTML.jpg

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