Shin Na Ra, Doucet Daniel, Pauchet Yannick
Department of Entomology, Max Planck Institute for Chemical Ecology, Jena, Germany.
Department of Insect Symbiosis, Max Planck Institute for Chemical Ecology, Jena, Germany.
Mol Biol Evol. 2022 Jun 28;39(6). doi: 10.1093/molbev/msac128.
The rise of functional diversity through gene duplication contributed to the adaption of organisms to various environments. Here we investigate the evolution of putative cellulases of the subfamily 2 of glycoside hydrolase family 5 (GH5_2) in the Cerambycidae (longhorned beetles), a megadiverse assemblage of mostly xylophagous beetles. Cerambycidae originally acquired GH5_2 from a bacterial donor through horizontal gene transfer (HGT), and extant species harbor multiple copies that arose from gene duplication. We ask how these digestive enzymes contributed to the ability of these beetles to feed on wood. We analyzed 113 GH5_2, including the functional characterization of 52 of them, derived from 25 species covering most subfamilies of Cerambycidae. Ancestral gene duplications led to five well-defined groups with distinct substrate specificity, allowing these beetles to break down, in addition to cellulose, polysaccharides that are abundant in plant cell walls (PCWs), namely, xyloglucan, xylan, and mannans. Resurrecting the ancestral enzyme originally acquired by HGT, we show it was a cellulase that was able to break down glucomannan and xylan. Finally, recent gene duplications further expanded the catalytic repertoire of cerambycid GH5_2, giving rise to enzymes that favor transglycosylation over hydrolysis. We suggest that HGT and gene duplication, which shaped the evolution of GH5_2, played a central role in the ability of cerambycid beetles to use a PCW-rich diet and may have contributed to their successful radiation.
通过基因复制实现的功能多样性增加,有助于生物体适应各种环境。在此,我们研究了天牛科(长角甲虫)中糖苷水解酶家族5亚家族2(GH5_2)推定纤维素酶的进化,天牛科是一个种类繁多的主要食木甲虫类群。天牛科最初通过水平基因转移(HGT)从细菌供体获得了GH5_2,现存物种含有多个因基因复制产生的拷贝。我们探究这些消化酶如何有助于这些甲虫取食木材的能力。我们分析了来自天牛科大多数亚科的25个物种的113个GH5_2,其中包括对52个进行的功能表征。祖先基因复制导致了五个具有明确底物特异性的组,使这些甲虫除了能分解纤维素外,还能分解植物细胞壁(PCW)中丰富的多糖,即木葡聚糖、木聚糖和甘露聚糖。复活最初通过HGT获得的祖先酶,我们发现它是一种能够分解葡甘露聚糖和木聚糖的纤维素酶。最后,最近的基因复制进一步扩大了天牛科GH5_2的催化范围,产生了更倾向于转糖基化而非水解的酶。我们认为,塑造了GH5_2进化的HGT和基因复制,在天牛科甲虫利用富含PCW的食物的能力中发挥了核心作用,并且可能促成了它们的成功辐射。