Biotechnology and Cell Signalling, IMPReSs Protein Facility, UMR7242 CNRS-University of Strasbourg, Illkirch, France.
Centre de Résonance Magnétique Nucléaire à Très Hauts Champs de Lyon (UMR 5082-CNRS, Université Claude Bernard Lyon 1, École Normale Supérieure Lyon), Université de Lyon, Villeurbanne, France.
Methods Mol Biol. 2022;2507:201-221. doi: 10.1007/978-1-0716-2368-8_11.
Membrane proteins (MPs) comprise about one-third of the human proteome, playing critical roles in many physiological processes and associated disorders. Consistently, they represent one of the largest classes of targets for the pharmaceutical industry. Their study at the molecular level is however particularly challenging, resulting in a severe lack of structural and dynamic information that is hindering their detailed functional characterization and the identification of novel potent drug candidates.Magic Angle Spinning (MAS) NMR is a reliable and efficient method for the determination of protein structures and dynamics and for the identification of ligand binding sites and equilibria. MAS-NMR is particularly well suited for MPs since they can be directly analysed in a native-like lipid bilayer environment but used to require aggravating large amounts of isotope enriched material. The frequent toxicity of human MP overexpression in bacterial cultures poses an additional hurdle, resulting in the need for alternative (and often more costly) expression systems. The recent development of very fast (up to 150 kHz) MAS probes has revolutionized the field of biomolecular solid-state NMR enabling higher spectral resolution with significant reduction of the required sample, rendering eukaryotic expression systems cost-effective.Here is presented a set of accessible procedures validated for the production and preparation of eukaryotic MPs for Fast-MAS H-detected NMR analysis. The methodology is illustrated with the human copper uptake protein hCTR1 recombinantly produced and C-N uniformly labeled with the versatile and affordable Pichia pastoris system. Subsequent purification procedures allow the recovery of mg amounts that are then reconstituted into liposome formulations compatible with solid-state NMR handling and analysis.
膜蛋白(MPs)约占人类蛋白质组的三分之一,在许多生理过程和相关疾病中发挥着关键作用。它们是制药行业最大的靶标之一。然而,在分子水平上对其进行研究特别具有挑战性,导致缺乏结构和动态信息,这阻碍了对其详细功能特征的描述以及新的有效药物候选物的鉴定。魔角旋转(MAS)NMR 是一种可靠且高效的方法,可用于测定蛋白质结构和动力学,以及鉴定配体结合位点和平衡。MAS-NMR 特别适合于 MPs,因为它们可以在类似于天然的脂质双层环境中直接进行分析,但以前需要使用大量的同位素富集材料。人类 MPs 在细菌培养物中过度表达的频繁毒性又增加了一个额外的障碍,这需要替代(通常更昂贵)的表达系统。最近非常快速(高达 150 kHz)MAS 探头的发展彻底改变了生物分子固态 NMR 领域,通过显著减少所需样品,实现了更高的光谱分辨率,使真核表达系统具有成本效益。本文介绍了一套可用于生产和制备真核 MPs 以进行快速 MAS H 检测 NMR 分析的可访问程序。该方法通过使用多功能且经济实惠的毕赤酵母系统对人铜摄取蛋白 hCTR1 进行重组表达和 C-N 均匀标记进行了说明。随后的纯化程序允许回收毫克量的蛋白质,然后将其重新配制为适合固态 NMR 处理和分析的脂质体配方。