McDonnell Erin I, Zipunnikov Vadim, Schrack Jennifer A, Goldsmith Jeff, Wrobel Julia
Department of Biostatistics, Mailman School of Public Health, Columbia University, New York, NY, USA.
Department of Biostatistics, Bloomberg School of Public Health, Johns Hopkins University, Baltimore, MD, USA.
Biol Rhythm Res. 2022;53(8):1299-1319. doi: 10.1080/09291016.2021.1929673. Epub 2022 May 31.
By collecting data continuously over 24 hours, accelerometers and other wearable devices can provide novel insights into circadian rhythms and their relationship to human health. Existing approaches for analyzing diurnal patterns using these data, including the cosinor model and functional principal components analysis, have revealed and quantified population-level diurnal patterns, but considerable subject-level variability remained uncaptured in features such as wake/sleep times and activity intensity. This remaining informative variability could provide a better understanding of chronotypes, or behavioral manifestations of one's underlying 24-hour rhythm. Curve registration, or alignment, is a technique in functional data analysis that separates "vertical" variability in activity intensity from "horizontal" variability in time-dependent markers like wake and sleep times; this data-driven approach is well-suited to studying chronotypes using accelerometer data. We develop a parametric registration framework for 24-hour accelerometric rest-activity profiles represented as dichotomized into epoch-level states of activity or rest. Specifically, we estimate subject-specific piecewise linear time-warping functions parametrized with a small set of parameters. We apply this method to data from the Baltimore Longitudinal Study of Aging and illustrate how estimated parameters give a more flexible quantification of chronotypes compared to traditional approaches.
通过连续24小时收集数据,加速度计和其他可穿戴设备能够为昼夜节律及其与人类健康的关系提供新的见解。利用这些数据来分析昼夜模式的现有方法,包括余弦节律模型和功能主成分分析,已经揭示并量化了群体水平的昼夜模式,但诸如清醒/睡眠时间和活动强度等特征中仍有相当一部分个体水平的变异性未被捕捉到。这种剩余的信息变异性有助于更好地理解昼夜节律类型,即个体潜在24小时节律的行为表现。曲线配准或对齐是功能数据分析中的一种技术,它将活动强度的“垂直”变异性与诸如清醒和睡眠时间等时间依赖性标记的“水平”变异性区分开来;这种数据驱动的方法非常适合使用加速度计数据来研究昼夜节律类型。我们为24小时加速度计静息-活动概况开发了一个参数化配准框架,该概况被二分划分为活动或静息的时段级状态。具体来说,我们估计用一小组参数参数化的特定于个体的分段线性时间扭曲函数。我们将此方法应用于巴尔的摩衰老纵向研究的数据,并说明与传统方法相比,估计参数如何能更灵活地量化昼夜节律类型。