13330Defence Science and Technology Laboratory, Porton Down, Salisbury, UK.
Statistical Sciences Research Institute, 152288University of Southampton, Salisbury, UK.
Stat Methods Med Res. 2022 Sep;31(9):1778-1789. doi: 10.1177/09622802221109523. Epub 2022 Jul 7.
Scientific advice to the UK government throughout the COVID-19 pandemic has been informed by ensembles of epidemiological models provided by members of the Scientific Pandemic Influenza group on Modelling. Among other applications, the model ensembles have been used to forecast daily incidence, deaths and hospitalizations. The models differ in approach (e.g. deterministic or agent-based) and in assumptions made about the disease and population. These differences capture genuine uncertainty in the understanding of disease dynamics and in the choice of simplifying assumptions underpinning the model. Although analyses of multi-model ensembles can be logistically challenging when time-frames are short, accounting for structural uncertainty can improve accuracy and reduce the risk of over-confidence in predictions. In this study, we compare the performance of various ensemble methods to combine short-term (14-day) COVID-19 forecasts within the context of the pandemic response. We address practical issues around the availability of model predictions and make some initial proposals to address the shortcomings of standard methods in this challenging situation.
在整个 COVID-19 大流行期间,英国政府获得了科学大流行流感建模专家组提供的流行病学模型集合的科学建议。除了其他应用外,模型集合还被用于预测每日发病率、死亡人数和住院人数。这些模型在方法(例如确定性或基于代理的)和对疾病和人群的假设方面存在差异。这些差异反映了对疾病动态理解和为模型提供支持的简化假设选择方面的真实不确定性。尽管在时间框架较短时,对多模型集合的分析在逻辑上具有挑战性,但考虑结构不确定性可以提高准确性并降低预测过度自信的风险。在这项研究中,我们比较了各种集合方法在大流行应对背景下结合短期(14 天)COVID-19 预测的性能。我们解决了模型预测可用性方面的实际问题,并针对这种具有挑战性的情况提出了一些解决标准方法缺点的初步建议。