Department of Biochemistry and Molecular Biology, College of Basic Medical Sciences, Chongqing Medical University, Chongqing 400016, China.
Molecular Medicine and Cancer Research Center, Chongqing Medical University, Chongqing 400016, China.
Int J Biol Sci. 2022 Jun 25;18(10):4151-4170. doi: 10.7150/ijbs.72386. eCollection 2022.
Lung adenocarcinoma (LUAD) causes severe cancer death worldwide. E2F2 is a canonical transcription factor implicated in transcription regulation, cell cycle and tumorigenesis. The role of E2F2 as well as its transcription regulatory network in LUAD remains obscure. In this study, we constructed a weighted gene co-expression network and identified several key modules and networks overrepresented in LUAD, including the E2F2-centered transcription regulatory network. Function analysis revealed that E2F2 overexpression accelerated cell growth, cell cycle progression and cell motility in LUAD cells whereas E2F2 knockdown inhibited these malignant phenotypes. Mechanistic investigations uncovered various E2F2-regulated downstream genes and oncogenic signaling pathways. Notably, three core transcription factors of E2F2, B-Myb and FOXM1 from the LUAD transcription regulatory network exhibited positive expression correlation, associated with each other, mutually transactivated each other, and regulated similar downstream gene cascades, hence constituting a consolidated core transcription regulatory circuitry. Moreover, E2F2 could promote and was essentially required for LUAD growth in orthotopic mouse models. Prognosis modeling revealed that a two-gene signature of E2F2 and PLK1 from the transcription regulatory circuitry remarkably stratified patients into low- and high-risk groups. Collectively, our results clarified the critical roles of E2F2 and the exquisite core transcription regulatory circuitry of E2F2/B-Myb/FOXM1 in LUAD progression.
肺腺癌 (LUAD) 在全球范围内导致严重的癌症死亡。E2F2 是一种经典的转录因子,涉及转录调控、细胞周期和肿瘤发生。E2F2 在 LUAD 中的作用及其转录调控网络仍然不清楚。在这项研究中,我们构建了一个加权基因共表达网络,鉴定了 LUAD 中几个关键的模块和网络,包括以 E2F2 为中心的转录调控网络。功能分析显示,E2F2 过表达加速了 LUAD 细胞的生长、细胞周期进程和细胞迁移,而 E2F2 敲低则抑制了这些恶性表型。机制研究揭示了各种 E2F2 调节的下游基因和致癌信号通路。值得注意的是,E2F2 调控网络中的三个核心转录因子 B-Myb 和 FOXM1 在 LUAD 中表现出阳性表达相关性,相互关联,相互转录激活,调节相似的下游基因级联,因此构成了一个整合的核心转录调控电路。此外,E2F2 可以促进和基本需要在原位小鼠模型中促进 LUAD 的生长。预后建模显示,转录调控网络中 E2F2 和 PLK1 的两个基因标志显著将患者分为低风险和高风险组。总之,我们的研究结果阐明了 E2F2 和 E2F2/B-Myb/FOXM1 的精细核心转录调控电路在 LUAD 进展中的关键作用。