Suppr超能文献

在 L. 中与低温胁迫相关的基因家族的全基因组鉴定、特征描述和表达分析

Genome-Wide Identification, Characterization, and Expression Analysis Related to Low-Temperature Stress of the Gene Family in L.

机构信息

College of Horticulture, Northwest A&F University, Xianyang 712100, China.

Key Laboratory of Protected Horticultural Engineering in Northwest, Ministry of Agriculture, Xianyang 712100, China.

出版信息

Int J Mol Sci. 2022 Jul 25;23(15):8190. doi: 10.3390/ijms23158190.

Abstract

Germin-like protein (GLP) participates in plant growth and development and plays an important role in plant stress. In the present study, 22 belonging to five classes were identified in the melon genome. Each member of the CmGLPs family contains a typical Cupin_1 domain. We conducted a genome-wide analysis of the melon gene family characterization. were randomly distributed in the melon chromosomes, with the largest number on chromosome 8, having eight family members. Gene duplication events drive the evolution and expansion of the melon gene family. Based on the phylogenetic tree analysis of GLP proteins in melon, rice, Arabidopsis, and cucumber, it was found that the gene families of different species have diverged in evolution. Based on qRT-PCR results, all members of the gene family could be expressed in different tissues of melon. Most genes were up-regulated after low-temperature stress. The relative expression of increased by 157.13 times at 48 h after low-temperature treatment. This finding suggests that the might play an important role in low-temperature stress in melon. Furthermore, quantitative dual LUC assays indicated that and can bind the promoter fragment of the . These results were helpful in understanding the functional succession and evolution of the melon gene family and further revealed the response of to low-temperature stress in melon.

摘要

类胚蛋白(GLP)参与植物的生长和发育,在植物胁迫反应中发挥着重要作用。本研究在甜瓜基因组中鉴定出 22 个属于五个类别的 GLP。CmGLPs 家族的每个成员都含有一个典型的 Cupin_1 结构域。我们对甜瓜基因家族特征进行了全基因组分析。这些基因随机分布在甜瓜染色体上,8 号染色体上的数量最多,有 8 个家族成员。基因复制事件驱动了甜瓜基因家族的进化和扩张。基于甜瓜、水稻、拟南芥和黄瓜中 GLP 蛋白的系统发育树分析,发现不同物种的基因家族在进化过程中已经分化。根据 qRT-PCR 结果,甜瓜基因家族的所有成员都可以在不同的组织中表达。大多数基因在低温胁迫后上调。低温处理 48 h 后,相对表达量增加了 157.13 倍。这表明该基因可能在甜瓜的低温胁迫中发挥重要作用。此外,定量双 LUC 测定表明和可以结合基因的启动子片段。这些结果有助于理解甜瓜基因家族的功能进化,并进一步揭示了基因对甜瓜低温胁迫的响应。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8c4a/9330424/6ad7030f02d5/ijms-23-08190-g001.jpg

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验