Department of Biochemistry and Microbiology, University of Chemistry and Technology Prague, Technicka 3, 16628 Prague, Czech Republic.
Institute of Microbiology of the Czech Academy of Sciences, Videnska 1083, 14220, Prague, Czech Republic.
Int J Syst Evol Microbiol. 2022 Aug;72(8). doi: 10.1099/ijsem.0.005467.
An orange-golden iridescent culture, designated A1X5R2, was isolated from a compost soil suspension which was amended with NCTC 2665 culture supernatant. The cells were non-motile, Gram-stain-negative, 0.4-0.5 µm wide and 0.7-1.4 µm long. The 16S rRNA-based phylogenetic and whole-genome analyses revealed that strain A1X5R2 forms a distinct lineage within the family and is closely related to members of the genus (, 93.04 % similarity, and , 92.77 %). The organism grew at 22-47 °C (optimal at 37 °C), salinity <3 % (optimal at 1.5 %) and at pH 7. The major respiratory quinone was ubiquinone-10, but a small quantity of ubiquinone-9 was also detected The major polyamine was homospermidine, but a small quantity of putrescine was also detected. The strain contained Cω7, C, C ω7 and C as the major fatty acids. The main polar lipids were phosphatidylethanolamine, phosphatidylglycerol, phosphatidylcholine, phosphatidylinositol, sphingoglycolipid, diphosphatidylglycerol, two unidentified phospholipids and three unidentified amino lipids. The DNA G+C content was 64.9 mol%. According to the results of phylogenetic and phylogenomic analyses, as well as its physiological characteristics, strain A2X5R2 represents the type species of a novel genus within the family . The name gen. nov., sp. nov. is proposed, with the type strain being A1X5R2 (=NCCB 100839=DSM 112829).
一株橙色金黄色的虹彩培养物,被命名为 A1X5R2,从添加 NCTC 2665 培养上清液的堆肥土壤悬浮液中分离得到。细胞是非运动的,革兰氏染色阴性,宽 0.4-0.5μm,长 0.7-1.4μm。基于 16S rRNA 的系统发育和全基因组分析表明,菌株 A1X5R2 在 科内形成一个独特的谱系,与属的成员密切相关 (,93.04%相似性,和 ,92.77%相似性)。该生物在 22-47°C(最佳温度为 37°C)、盐度<3%(最佳为 1.5%)和 pH 值 7 下生长。主要呼吸醌是泛醌-10,但也检测到少量的泛醌-9。主要多胺是腐胺,但也检测到少量精胺。该菌株含有 Cω7、C16:0、Cω7 和 C16:1 作为主要脂肪酸。主要极性脂是磷脂酰乙醇胺、磷脂酰甘油、磷脂酰胆碱、磷脂酰肌醇、神经酰胺糖脂、双磷脂酰甘油、两种未鉴定的磷脂和三种未鉴定的氨基酸脂。DNA G+C 含量为 64.9mol%。根据系统发育和系统基因组分析以及生理特性的结果,菌株 A2X5R2 代表了科内一个新属的模式种。提议使用新属名 属. nov.,sp. nov.,其模式菌株为 A1X5R2(=NCCB 100839=DSM 112829)。