Suppr超能文献

焦亡相关特征作为预测结直肠癌患者预后和治疗反应的潜在生物标志物

Pyroptosis-Related Signature as Potential Biomarkers for Predicting Prognosis and Therapy Response in Colorectal Cancer Patients.

作者信息

Li Zhiyong, Liu Yang, Lin Baiqiang, Yan Wei, Yi Huijie, Wang Haoran, Wei Yunwei

机构信息

Department of Oncological and Endoscopic Surgery, The First Affiliated Hospital of Harbin Medical University, Harbin, China.

Translational Medicine Research and Cooperation Center of Northern China, Heilongjiang Academy of Medical Sciences, Harbin, China.

出版信息

Front Genet. 2022 Jul 22;13:925338. doi: 10.3389/fgene.2022.925338. eCollection 2022.

Abstract

Abnormal mucosal inflammation is a critical risk factor for pathogenesis and progression of colorectal cancer (CRC). As a type of proinflammatory death, pyroptosis can recast a suitable microenvironment to promote tumor growth. However, the potential role of pyroptosis in CRC remains unclear. A total of 38 pyroptosis-related gene (PRG) expression profiles and clinical information were collected from multiple public datasets. Bioinformatics methods were used to analyze the clinical significance, functional status, immune infiltration, genomic alteration, and drug sensitivity in different subgroups. Whole-genome microarray analysis was performed to analyze the regulation of gut microbiota on the expression of PRGs. Two distinct molecular subtypes were identified and suggested that multilayer PRG alterations were associated with patient clinicopathological features, prognosis, and tumor microenvironment (TME) infiltrating characteristics. Furthermore, we obtained eight PRG signatures by applying differential expression analysis and univariate Cox and Lasso regression analyses. A risk prognosis model was constructed for predicting overall survival (OS) and recurrence-free survival (RFS) based on the PRG signature. There were significant differences in clinical characteristics, 22 immune cells, and immune functions between the high- and low-risk groups. In addition, the PRG signature was significantly associated with the microsatellite instability (MSI), tumor mutation burden (TMB), cancer stem cell (CSC) index, immunotherapeutic characteristics, and chemotherapeutic drug sensitivity. Moreover, the experiments had shown that () could affect the CASP6 expression, which was associated with the chemoresistance to 5-fluorouracil (5-Fu) in CRC. Our findings provided a foundation for future research targeting pyroptosis and a new insight into the prognosis and immune cell infiltration of CRC, and they suggested that might influence CRC progression through pyroptosis.

摘要

异常的黏膜炎症是结直肠癌(CRC)发病机制和进展的关键危险因素。作为一种促炎性死亡方式,细胞焦亡可以重塑适宜的微环境以促进肿瘤生长。然而,细胞焦亡在CRC中的潜在作用仍不清楚。从多个公共数据集收集了总共38个细胞焦亡相关基因(PRG)的表达谱和临床信息。采用生物信息学方法分析不同亚组中的临床意义、功能状态、免疫浸润、基因组改变和药物敏感性。进行全基因组微阵列分析以分析肠道微生物群对PRG表达的调控。识别出两种不同的分子亚型,并表明多层PRG改变与患者临床病理特征、预后和肿瘤微环境(TME)浸润特征相关。此外,通过应用差异表达分析以及单变量Cox和Lasso回归分析,我们获得了8个PRG特征。基于PRG特征构建了一个风险预后模型,用于预测总生存期(OS)和无复发生存期(RFS)。高风险组和低风险组在临床特征、22种免疫细胞和免疫功能方面存在显著差异。此外,PRG特征与微卫星不稳定性(MSI)、肿瘤突变负担(TMB)、癌症干细胞(CSC)指数、免疫治疗特征和化疗药物敏感性显著相关。而且,实验表明()可影响CASP6表达,这与CRC对5-氟尿嘧啶(5-Fu)的化疗耐药性相关。我们的研究结果为未来针对细胞焦亡的研究提供了基础,并为CRC的预后和免疫细胞浸润提供了新的见解,且表明()可能通过细胞焦亡影响CRC进展。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f7dc/9355164/116d2bcc22f2/fgene-13-925338-g001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验