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Sf9 纯化超延伸驱动蛋白-3 家族马达的单分子分析。

Single-Molecule Analysis of Sf9 Purified Superprocessive Kinesin-3 Family Motors.

机构信息

Discipline of Biological Engineering, Indian Institute of Technology Gandhinagar; Department of Biotechnology and Bioinformatics, Sambalpur University.

Discipline of Biological Engineering, Indian Institute of Technology Gandhinagar.

出版信息

J Vis Exp. 2022 Jul 27(185). doi: 10.3791/63837.

Abstract

A complex cellular environment poses challenges for single-molecule motility analysis. However, advancement in imaging techniques have improved single-molecule studies and has gained immense popularity in detecting and understanding the dynamic behavior of fluorescent-tagged molecules. Here, we describe a detailed method for in vitro single-molecule studies of kinesin-3 family motors using Total Internal Reflection Fluorescence (TIRF) microscopy. Kinesin-3 is a large family that plays critical roles in cellular and physiological functions ranging from intracellular cargo transport to cell division to development. We have shown previously that constitutively active dimeric kinesin-3 motors exhibit fast and superprocessive motility with high microtubule affinity at the single-molecule level using cell lysates prepared by expressing motor in mammalian cells. Our lab studies kinesin-3 motors and their regulatory mechanisms using cellular, biochemical and biophysical approaches, and such studies demand purified proteins at a large scale. Expression and purification of these motors using mammalian cells would be expensive and time-consuming, whereas expression in a prokaryotic expression system resulted in significantly aggregated and inactive protein. To overcome the limitations posed by bacterial purification systems and mammalian cell lysate, we have established a robust Sf9-baculovirus expression system to express and purify these motors. The kinesin-3 motors are C-terminally tagged with 3-tandem fluorescent proteins (3xmCitirine or 3xmCit) that provide enhanced signals and decreased photobleaching. In vitro single-molecule and multi-motor gliding analysis of Sf9 purified proteins demonstrate that kinesin-3 motors are fast and superprocessive akin to our previous studies using mammalian cell lysates. Other applications using these assays include detailed knowledge of oligomer conditions of motors, specific binding partners paralleling biochemical studies, and their kinetic state.

摘要

复杂的细胞环境给单分子运动分析带来了挑战。然而,成像技术的进步改善了单分子研究,并在检测和理解荧光标记分子的动态行为方面获得了广泛的关注。在这里,我们描述了一种使用全内反射荧光(TIRF)显微镜进行体外 kinesin-3 家族马达的单分子研究的详细方法。kinesin-3 是一个大家族,在细胞内货物运输、细胞分裂、发育等细胞和生理功能中发挥着关键作用。我们之前已经表明,在哺乳动物细胞中表达马达后,组成型激活的二聚体 kinesin-3 马达在单细胞水平上表现出快速和超延伸运动,以及与微管的高亲和力。我们的实验室使用细胞、生化和生物物理方法研究 kinesin-3 马达及其调节机制,这些研究需要大规模的纯化蛋白。使用哺乳动物细胞表达和纯化这些马达既昂贵又耗时,而在原核表达系统中表达会导致蛋白显著聚集和失活。为了克服细菌纯化系统和哺乳动物细胞裂解物带来的限制,我们建立了一个强大的 Sf9-杆状病毒表达系统来表达和纯化这些马达。kinesin-3 马达的 C 端被 3 个串联荧光蛋白(3xmCitirine 或 3xmCit)标记,这提供了增强的信号和减少的荧光漂白。Sf9 纯化蛋白的体外单分子和多马达滑行分析表明,kinesin-3 马达与我们之前使用哺乳动物细胞裂解物的研究一样快速且超延伸。这些测定的其他应用包括对马达的寡聚条件、与生化研究平行的特定结合伙伴以及它们的动力学状态的详细了解。

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