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(pers)Decne叶的植物化学特征、功能营养及抗糖尿病潜力:计算机模拟和体外研究

Phytochemical Characterization, Functional Nutrition, and Anti-Diabetic Potentials of (pers) Decne Leaves: In Silico and In Vitro Studies.

作者信息

Chukwuma Ifeoma Felicia, Nworah Florence Nkechi, Apeh Victor Onukwube, Omeje Kingsley Ozioma, Nweze Ekene John, Asogwa Chukwudi Daniel, Ezeorba Timothy Prince Chidike

机构信息

Department of Biochemistry, Faculty of Biological Sciences, University of Nigeria, Nsukka, Nigeria.

Department of Genetics and Biotechnology, Faculty of Biological Sciences, University of Nigeria, Nsukka, Nigeria.

出版信息

Bioinform Biol Insights. 2022 Aug 11;16:11779322221115436. doi: 10.1177/11779322221115436. eCollection 2022.

Abstract

The geometrical increase in diabetes mellitus (DM) and the undesirable side effects of synthetic drugs have intensified efforts to search for an effective and safe anti-diabetic therapy. This study aimed to identify the antioxidant and anti-diabetic agents in the ethanol extract of (EELH). The phytochemicals, antioxidant vitamins, and minerals present in EELH were determined using standard procedures to achieve this aim. Gas chromatography coupled with mass spectroscopy and flame ionization detector (GC-MS/GC-FID) was employed to identify bioactive compounds. An e-pharmacophore model was generated from the extra precision, and energy-minimized docked position of standard inhibitor, acarbose onto human pancreatic amylase (HPA, PDB-6OCN). It was used to screen the GC-MS/GC-FID library of compounds. The top-scoring compounds were subjected to glide XP-docking and prime MM-GBSA calculation with the Schrodinger suite-v12.4. The Adsorption, Distribution, Metabolism, Excretion, and Toxicity (ADMET) prediction of the best-fit compounds was made using SwissADME and PROTOX-II webservers. Further validation of the docking results was performed with the in vitro analysis of the α-amylase and α-glucosidase inhibitory activities. EELH contains appreciable amounts of antioxidant and anti-diabetic phytoconstituents. The top-4 scoring compounds (rutin, epicatechin, kaempferol, and naringenin) from the EELH phytochemical library interacted with amino acid residues within and around the HPA active site. The ADMET prediction shows that epicatechin, kaempferol, and naringenin had favorable drug-likeness, pharmacokinetic properties, and a good safety profile. EELH demonstrated good inhibitory actions against α-amylase and α-glucosidase with 1C values of 14.14 and 4.22 µg/mL, respectively. Thus, phytoconstituents are promising novel candidates for developing an anti-diabetic drug.

摘要

糖尿病(DM)的几何级数增长以及合成药物的不良副作用,加大了人们寻找有效且安全的抗糖尿病疗法的力度。本研究旨在鉴定[植物名称]乙醇提取物(EELH)中的抗氧化剂和抗糖尿病药物。为此,采用标准程序测定了EELH中存在的植物化学物质、抗氧化维生素和矿物质。利用气相色谱-质谱联用仪和火焰离子化检测器(GC-MS/GC-FID)鉴定生物活性化合物。从标准抑制剂阿卡波糖在人胰腺淀粉酶(HPA,PDB-6OCN)上的超精确且能量最小化的对接位置生成了一个电子药效团模型。它被用于筛选化合物的GC-MS/GC-FID库。得分最高的化合物使用Schrodinger套件v12.4进行Glide XP对接和Prime MM-GBSA计算。使用SwissADME和PROTOX-II网络服务器对最佳拟合化合物进行吸收、分布、代谢、排泄和毒性(ADMET)预测。通过对α-淀粉酶和α-葡萄糖苷酶抑制活性的体外分析对对接结果进行了进一步验证。EELH含有大量具有抗氧化和抗糖尿病作用的植物成分。EELH植物化学库中得分最高的4种化合物(芦丁、表儿茶素、山奈酚和柚皮素)与HPA活性位点内及周围的氨基酸残基相互作用。ADMET预测表明,表儿茶素、山奈酚和柚皮素具有良好的类药物性质、药代动力学特性和良好的安全性。EELH对α-淀粉酶和α-葡萄糖苷酶表现出良好的抑制作用,IC值分别为14.14和4.22μg/mL。因此,植物成分是开发抗糖尿病药物的有前途的新候选物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4f8/9379957/d9ef22fac2bd/10.1177_11779322221115436-fig1.jpg

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