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西西伯利亚南部不同耕作方式下的土壤真菌群落多样性

Soil Mycobiome Diversity under Different Tillage Practices in the South of West Siberia.

作者信息

Naumova Natalia, Barsukov Pavel, Baturina Olga, Rusalimova Olga, Kabilov Marsel

机构信息

Institute of Soil Science and Agrochemistry, Siberian Branch of the Russian Academy of Sciences, 630090 Novosibirsk, Russia.

Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of the Russian Academy of Sciences, 630090 Novosibirsk, Russia.

出版信息

Life (Basel). 2022 Jul 31;12(8):1169. doi: 10.3390/life12081169.

Abstract

Managing soil biodiversity by reduced or no tillage is an increasingly popular approach. Soil mycobiome in Siberian agroecosystems has been scarcely studied; little is known about its changes due to tillage. We studied mycobiome in Chernozem under natural steppe vegetation and cropped for wheat by conventional or no tillage in a long-term field trial in West Siberia, Russia, by using ITS2 rDNA gene marker (Illumina MiSeq sequencing). Half of the identified OTUs were with 82% of the total number of sequence reads and showing, like other phyla (, , , , ), field-related differential abundance. Several dominant genera (, , , , and ) had increased abundance in both cropped soils as compared with the undisturbed one and therefore can be safely assumed to be associated with wheat residues. Fungal OTUs' richness in cropped soils was less than in the undisturbed one; however, no tillage shifted soil mycobiome composition closer to the latter, albeit, it was still similar to the ploughed soil, despite different organic matter and wheat residue content. The study provided the first inventory of soil mycobiome under different tillage treatments in the south of West Siberia, where wheat production is an important section of the regional economy.

摘要

通过减少耕作或免耕来管理土壤生物多样性是一种越来越流行的方法。西伯利亚农业生态系统中的土壤真菌群落鲜有研究;对于其因耕作而发生的变化知之甚少。在俄罗斯西西伯利亚的一项长期田间试验中,我们利用ITS2 rDNA基因标记(Illumina MiSeq测序),研究了天然草原植被下黑钙土以及采用传统耕作或免耕种植小麦的土壤中的真菌群落。已鉴定出的操作分类单元(OTU)中有一半占序列读数总数的82%,并且与其他门类(、、、、)一样,呈现出与田间相关的差异丰度。与未扰动土壤相比,几种优势属(、、、、和)在两种种植土壤中的丰度均有所增加,因此可以合理推测它们与小麦残茬有关。种植土壤中真菌OTU的丰富度低于未扰动土壤;然而,免耕使土壤真菌群落组成更接近后者,尽管由于有机物质和小麦残茬含量不同,其仍与耕作土壤相似。该研究首次对西西伯利亚南部不同耕作处理下的土壤真菌群落进行了清查,该地区小麦生产是区域经济的重要组成部分。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bf9e/9409700/73ec79e6f055/life-12-01169-g001a.jpg

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