Bayram Șafak, Razzaque Yasmin Sophiya, Geisberger Sabrina, Pietzke Matthias, Fürst Susanne, Vechiatto Carolina, Forbes Martin, Mastrobuoni Guido, Kempa Stefan
Proteomics and Metabolomics Platform, Max-Delbrück-Center for Molecular Medicine (MDC), Berlin Institute for Medical Systems Biology (BIMSB), Berlin, Germany.
Mass Spectrometry Facility, Max Planck Institute for Molecular Genetics, Berlin, Germany.
Front Mol Biosci. 2022 Aug 12;9:859787. doi: 10.3389/fmolb.2022.859787. eCollection 2022.
Cellular glutamine synthesis is thought to be an important resistance factor in protecting cells from nutrient deprivation and may also contribute to drug resistance. The application of ‟targeted stable isotope resolved metabolomics" allowed to directly measure the activity of glutamine synthetase in the cell. With the help of this method, the fate of glutamine derived nitrogen within the biochemical network of the cells was traced. The application of stable isotope labelled substrates and analyses of isotope enrichment in metabolic intermediates allows the determination of metabolic activity and flux in biological systems. In our study we used stable isotope labelled substrates of glutamine synthetase to demonstrate its role in the starvation response of cancer cells. We applied C labelled glutamate and N labelled ammonium and determined the enrichment of both isotopes in glutamine and nucleotide species. Our results show that the metabolic compensatory pathways to overcome glutamine depletion depend on the ability to synthesise glutamine glutamine synthetase. We demonstrate that the application of dual-isotope tracing can be used to address specific reactions within the biochemical network directly. Our study highlights the potential of concurrent isotope tracing methods in medical research.
细胞谷氨酰胺合成被认为是保护细胞免受营养剥夺的重要抗性因素,也可能导致耐药性。“靶向稳定同位素分辨代谢组学”的应用使得直接测量细胞中谷氨酰胺合成酶的活性成为可能。借助这种方法,追踪了细胞生化网络中谷氨酰胺衍生氮的去向。稳定同位素标记底物的应用以及代谢中间体中同位素富集的分析能够确定生物系统中的代谢活性和通量。在我们的研究中,我们使用谷氨酰胺合成酶的稳定同位素标记底物来证明其在癌细胞饥饿反应中的作用。我们应用碳标记的谷氨酸和氮标记的铵,并确定了谷氨酰胺和核苷酸种类中两种同位素的富集情况。我们的结果表明,克服谷氨酰胺消耗的代谢补偿途径取决于合成谷氨酰胺(谷氨酰胺合成酶)的能力。我们证明双同位素示踪的应用可直接用于研究生化网络中的特定反应。我们的研究突出了同步同位素示踪方法在医学研究中的潜力。