Center for Molecular and Cellular Biology, Skolkovo Institute of Science and Technology, Moscow, Russia.
Institute of Carcinogenesis, Blokhin National Medical Research Center of Oncology, Ministry of Health of the Russian Federation, Moscow, Russia.
Dokl Biochem Biophys. 2022 Aug;505(1):137-140. doi: 10.1134/S1607672922040020. Epub 2022 Aug 29.
A lot of long non-coding RNAs (lncRNAs) are expressed in human cells in a number of transcripts of different lengths and composition of exons. In case of cancer-associated lncRNAs, an actual task is to determine their specific isoforms, since each transcript can perform its own function in carcinogenesis and might have a unique expression profile in various types of tumors. For the first time, we analyzed the expression of CASC8 lncRNA in human pancreatic ductal adenocarcinoma cell lines and found an abundant isoform that was previously considered as the minor one in this type of cancer. We also revealed extremely high expression levels of all CASC8 transcripts in MIA PaCa-2 cells and, conversely, the lack of this lncRNA in PANC-1. This allows to use them as convenient models for further in vitro studies.
许多长非编码 RNA(lncRNA)在人类细胞中以不同长度和外显子组成的多个转录本表达。在与癌症相关的 lncRNA 的情况下,实际的任务是确定它们的特定亚型,因为每个转录本在致癌作用中都可以发挥自己的功能,并且在各种类型的肿瘤中可能具有独特的表达谱。我们首次分析了 CASC8 lncRNA 在人胰腺导管腺癌细胞系中的表达,发现了一种以前被认为在这种癌症中较少的丰富亚型。我们还揭示了所有 CASC8 转录本在 MIA PaCa-2 细胞中的极高表达水平,相反,在 PANC-1 中缺乏这种 lncRNA。这使得它们可以作为进一步体外研究的便利模型。