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使用 K2 和 K3 直接电子探测器进行电子计数微 ED 数据采集。

Electron-counting MicroED data with the K2 and K3 direct electron detectors.

机构信息

Department of Biological Chemistry, University of California, Los Angeles CA 90095, United States; Howard Hughes Medical Institute, University of California, Los Angeles CA 90095, United States.

Chemical Engineering, School for Engineering of Matter, Arizona State University, Tempe, AZ, United States; Center for Applied Structural Discovery, Biodesign Institute, Arizona State University, Tempe, AZ, United States.

出版信息

J Struct Biol. 2022 Dec;214(4):107886. doi: 10.1016/j.jsb.2022.107886. Epub 2022 Aug 28.

Abstract

Microcrystal electron diffraction (MicroED) uses electron cryo-microscopy (cryo-EM) to collect diffraction data from small crystals during continuous rotation of the sample. As a result of advances in hardware as well as methods development, the data quality has continuously improved over the past decade, to the point where even macromolecular structures can be determined ab initio. Detectors suitable for electron diffraction should ideally have fast readout to record data in movie mode, and high sensitivity at low exposure rates to accurately report the intensities. Direct electron detectors are commonly used in cryo-EM imaging for their sensitivity and speed, but despite their availability are generally not used in diffraction. Primary concerns with diffraction experiments are the dynamic range and coincidence loss, which will corrupt the measurement if the flux exceeds the count rate of the detector. Here, we describe instrument setup and low-exposure MicroED data collection in electron-counting mode using K2 and K3 direct electron detectors and show that the integrated intensities can be effectively used to solve structures of two macromolecules between 1.2 Å and 2.8 Å resolution. Even though a beam stop was not used with the K3 studies we did not observe damage to the camera. As these cameras are already available in many cryo-EM facilities, this provides opportunities for users who do not have access to dedicated facilities for MicroED.

摘要

微晶体电子衍射(MicroED)使用电子低温冷冻显微镜(cryo-EM)在样品连续旋转时从小晶体中收集衍射数据。由于硬件和方法开发的进步,在过去十年中,数据质量不断提高,以至于即使是大分子结构也可以从头确定。理想情况下,适合电子衍射的探测器应具有快速读出功能,以便以电影模式记录数据,并具有低曝光率下的高灵敏度,以准确报告强度。直接电子探测器由于其灵敏度和速度,常用于 cryo-EM 成像,但尽管它们已经可用,但通常不用于衍射。衍射实验的主要关注点是动态范围和符合损失,如果通量超过探测器的计数率,这将破坏测量。在这里,我们描述了在电子计数模式下使用 K2 和 K3 直接电子探测器进行仪器设置和低曝光 MicroED 数据采集,并表明集成强度可有效用于解决两个大小介于 1.2Å 和 2.8Å 分辨率的大分子结构。尽管在 K3 研究中没有使用光束截止器,但我们没有观察到相机损坏。由于这些相机已经在许多 cryo-EM 设施中可用,这为那些无法使用专门的 MicroED 设施的用户提供了机会。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f432/9999727/ec6c388cff51/nihms-1878587-f0001.jpg

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