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结构生物学中心的固定靶串行晶体学。

Fixed-target serial crystallography at the Structural Biology Center.

机构信息

Structural Biology Center, X-ray Science Division, Argonne National Laboratory, Lemont, IL 60439, USA.

Center for Structural Genomics of Infectious Diseases, Consortium for Advanced Science and Engineering, University of Chicago, Chicago, IL 60667, USA.

出版信息

J Synchrotron Radiat. 2022 Sep 1;29(Pt 5):1141-1151. doi: 10.1107/S1600577522007895. Epub 2022 Aug 17.

Abstract

Serial synchrotron crystallography enables the study of protein structures under physiological temperature and reduced radiation damage by collection of data from thousands of crystals. The Structural Biology Center at Sector 19 of the Advanced Photon Source has implemented a fixed-target approach with a new 3D-printed mesh-holder optimized for sample handling. The holder immobilizes a crystal suspension or droplet emulsion on a nylon mesh, trapping and sealing a near-monolayer of crystals in its mother liquor between two thin Mylar films. Data can be rapidly collected in scan mode and analyzed in near real-time using piezoelectric linear stages assembled in an XYZ arrangement, controlled with a graphical user interface and analyzed using a high-performance computing pipeline. Here, the system was applied to two β-lactamases: a class D serine β-lactamase from Chitinophaga pinensis DSM 2588 and L1 metallo-β-lactamase from Stenotrophomonas maltophilia K279a.

摘要

连续同步辐射晶体学通过从数千个晶体中收集数据,能够在生理温度和减少辐射损伤的条件下研究蛋白质结构。高级光源 19 号扇区的结构生物学中心采用了一种固定靶方法,使用新的 3D 打印网格支架进行优化,以进行样品处理。该支架将晶体悬浮液或液滴乳液固定在尼龙网格上,在两层薄聚酯薄膜之间的母液中捕获并密封近单层晶体。使用组装成 XYZ 排列的压电线性平台可以快速以扫描模式收集数据,并使用图形用户界面进行控制,使用高性能计算管道进行近乎实时的分析。在这里,该系统应用于两种β-内酰胺酶:来自几丁质分解菌 DSM 2588 的 D 类丝氨酸β-内酰胺酶和来自嗜麦芽寡养单胞菌 K279a 的 L1 金属β-内酰胺酶。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc37/9455217/5113ef2dd79e/s-29-01141-fig1.jpg

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