Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Center for Computational and Integrative Biology and Department of Molecular Biology, Massachusetts General Hospital, Boston, MA, USA.
Nat Microbiol. 2022 Oct;7(10):1673-1685. doi: 10.1038/s41564-022-01224-7. Epub 2022 Sep 22.
Colonization of the intestine by oral microbes has been linked to multiple diseases such as inflammatory bowel disease and colon cancer, yet mechanisms allowing expansion in this niche remain largely unknown. Veillonella parvula, an asaccharolytic, anaerobic, oral microbe that derives energy from organic acids, increases in abundance in the intestine of patients with inflammatory bowel disease. Here we show that nitrate, a signature metabolite of inflammation, allows V. parvula to transition from fermentation to anaerobic respiration. Nitrate respiration, through the narGHJI operon, boosted Veillonella growth on organic acids and also modulated its metabolic repertoire, allowing it to use amino acids and peptides as carbon sources. This metabolic shift was accompanied by changes in carbon metabolism and ATP production pathways. Nitrate respiration was fundamental for ectopic colonization in a mouse model of colitis, because a V. parvula narG deletion mutant colonized significantly less than a wild-type strain during inflammation. These results suggest that V. parvula harness conditions present during inflammation to colonize in the intestine.
肠道内的口腔微生物定植与多种疾病有关,如炎症性肠病和结肠癌,但允许在这个生态位中扩张的机制在很大程度上仍不清楚。韦荣氏球菌(Veillonella parvula)是一种无发酵作用的厌氧口腔微生物,从有机酸中获取能量,在炎症性肠病患者的肠道中丰度增加。在这里,我们表明,硝酸盐,一种炎症的特征代谢物,允许 Veillonella parvula 从发酵过渡到无氧呼吸。通过 narGHJI 操纵子进行的硝酸盐呼吸,促进了韦荣氏球菌对有机酸的生长,同时也调节了其代谢组,使其能够将氨基酸和肽用作碳源。这种代谢转变伴随着碳代谢和 ATP 产生途径的变化。硝酸盐呼吸对于结肠炎的小鼠模型中的异位定植至关重要,因为在炎症期间,韦荣氏球菌 narG 缺失突变体的定植明显少于野生型菌株。这些结果表明,韦荣氏球菌利用炎症过程中存在的条件在肠道中定植。