自由基 S-腺苷甲硫氨酸酶:自由基反应的自然选择。
Radical SAM enzymes: Nature's choice for radical reactions.
机构信息
Department of Chemistry & Biochemistry, Montana State University, Bozeman, MT, USA.
Department of Chemistry, Northwestern University, Evanston, IL, USA.
出版信息
FEBS Lett. 2023 Jan;597(1):92-101. doi: 10.1002/1873-3468.14519. Epub 2022 Oct 27.
Enzymes that use a [4Fe-4S] cluster plus S-adenosyl-l-methionine (SAM) to initiate radical reactions (radical SAM) form the largest enzyme superfamily, with over half a million members across the tree of life. This review summarizes recent work revealing the radical SAM reaction pathway, which ultimately liberates the 5'-deoxyadenosyl (5'-dAdo•) radical to perform extremely diverse, highly regio- and stereo-specific, transformations. Most surprising was the discovery of an organometallic intermediate Ω exhibiting an Fe-C5'-adenosyl bond. Ω liberates 5'-dAdo• through homolysis of the Fe-C5' bond, in analogy to Co-C5' bond homolysis in B , previously viewed as biology's paradigmatic radical generator. The 5'-dAdo• has been trapped and characterized in radical SAM enzymes via a recently discovered photoreactivity of the [4Fe-4S] /SAM complex, and has been confirmed as a catalytically active intermediate in enzyme catalysis. The regioselective SAM S-C bond cleavage to produce 5'-dAdo• originates in the Jahn-Teller effect. The simplicity of SAM as a radical precursor, and the exquisite control of 5'-dAdo• reactivity in radical SAM enzymes, may be why radical SAM enzymes pervade the tree of life, while B enzymes are only a few.
利用 [4Fe-4S] 簇和 S-腺苷甲硫氨酸(SAM)引发自由基反应(自由基 SAM)的酶形成了最大的酶超家族,在生命之树上有超过 50 万个成员。这篇综述总结了最近揭示自由基 SAM 反应途径的工作,该途径最终释放 5'-脱氧腺苷(5'-dAdo•)自由基,以执行极其多样、高度区域和立体特异性的转化。最令人惊讶的是发现了一种含有 Fe-C5'-腺苷键的有机金属中间体 Ω。Ω 通过 Fe-C5'键的均裂释放 5'-dAdo•,类似于之前被视为生物学典范自由基生成体的 Co-C5'键均裂。通过最近发现的 [4Fe-4S] /SAM 复合物的光反应,在自由基 SAM 酶中已经捕获和表征了 5'-dAdo•,并在酶催化中已被确认为催化活性中间体。SAM 的 S-C 键的区域选择性断裂以产生 5'-dAdo•起源于 Jahn-Teller 效应。SAM 作为自由基前体的简单性,以及自由基 SAM 酶中 5'-dAdo•反应性的精细控制,可能是为什么自由基 SAM 酶遍布生命之树,而 B 酶却很少的原因。