Department of Chemistry, Northwestern University, Evanston, Illinois, USA.
Department of Chemistry and Biochemistry, Montana State University, Bozeman, Montana, USA; email:
Annu Rev Biochem. 2023 Jun 20;92:333-349. doi: 10.1146/annurev-biochem-052621-090638. Epub 2023 Apr 4.
Radical -adenosylmethionine (SAM) enzymes use a site-differentiated [4Fe-4S] cluster and SAM to initiate radical reactions through liberation of the 5'-deoxyadenosyl (5'-dAdo•) radical. They form the largest enzyme superfamily, with more than 700,000 unique sequences currently, and their numbers continue to grow as a result of ongoing bioinformatics efforts. The range of extremely diverse, highly regio- and stereo-specific reactions known to be catalyzed by radical SAM superfamily members is remarkable. The common mechanism of radical initiation in the radical SAM superfamily is the focus of this review. Most surprising is the presence of an organometallic intermediate, Ω, exhibiting an Fe-C5'-adenosyl bond. Regioselective reductive cleavage of the SAM S-C5' bond produces 5'-dAdo• to form Ω, with the regioselectivity originating in the Jahn-Teller effect. Ω liberates the free 5'-dAdo• as the catalytically active intermediate through homolysis of the Fe-C5' bond, in analogy to Co-C5' bond homolysis in B, which was once viewed as biology's choice of radical generator.
自由基 -腺苷甲硫氨酸 (SAM) 酶利用位点区分的 [4Fe-4S] 簇和 SAM 通过释放 5'-脱氧腺苷(5'-dAdo•)自由基来引发自由基反应。它们形成了最大的酶超家族,目前拥有超过 70 万个独特的序列,并且由于正在进行的生物信息学努力,它们的数量还在继续增长。自由基 SAM 超家族成员催化的反应范围非常广泛,具有高度区域和立体特异性。自由基 SAM 超家族中自由基引发的常见机制是本综述的重点。最令人惊讶的是存在有机金属中间体 Ω,其表现出 Fe-C5'-腺苷键。SAM S-C5'键的区域选择性还原裂解产生 5'-dAdo•以形成 Ω,区域选择性源于 Jahn-Teller 效应。Ω 通过 Fe-C5'键的均裂释放游离的 5'-dAdo•作为催化活性中间体,类似于 B 中 Co-C5'键的均裂,B 曾经被视为生物学选择的自由基生成剂。