• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

直接实验观察隐花色素的蓝光诱导构象变化和分子间相互作用。

Direct experimental observation of blue-light-induced conformational change and intermolecular interactions of cryptochrome.

机构信息

State Key Laboratory of Surface Physics, Department of Physics, Fudan University, 200433, Shanghai, China.

Beijing Computational Science Research Center, 100193, Beijing, China.

出版信息

Commun Biol. 2022 Oct 18;5(1):1103. doi: 10.1038/s42003-022-04054-9.

DOI:10.1038/s42003-022-04054-9
PMID:36257983
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9579160/
Abstract

Cryptochromes are blue light receptors that mediate circadian rhythm and magnetic sensing in various organisms. A typical cryptochrome consists of a conserved photolyase homology region domain and a varying carboxyl-terminal extension across species. The structure of the flexible carboxyl-terminal extension and how carboxyl-terminal extension participates in cryptochrome's signaling function remain mostly unknown. In this study, we uncover the potential missing link between carboxyl-terminal extension conformational changes and downstream signaling functions. Specifically, we discover that the blue-light induced opening of carboxyl-terminal extension in C. reinhardtii animal-like cryptochrome can structurally facilitate its interaction with Rhythm Of Chloroplast 15, a circadian-clock-related protein. Our finding is made possible by two technical advances. Using single-molecule Förster resonance energy transfer technique, we directly observe the displacement of carboxyl-terminal extension by about 15 Å upon blue light excitation. Combining structure prediction and solution X-ray scattering methods, we propose plausible structures of full-length cryptochrome under dark and lit conditions. The structures provide molecular basis for light active conformational changes of cryptochrome and downstream regulatory functions.

摘要

隐花色素是一种蓝光受体,在各种生物中介导昼夜节律和磁感觉。典型的隐花色素由保守的光解酶同源区结构域和跨物种的变化羧基末端延伸组成。柔性羧基末端延伸的结构以及羧基末端延伸如何参与隐花色素的信号转导功能在很大程度上仍然未知。在这项研究中,我们揭示了羧基末端延伸构象变化与下游信号转导功能之间潜在的缺失联系。具体来说,我们发现蓝光照诱导的 C. reinhardtii 动物样隐花色素羧基末端延伸的开放可以在结构上促进其与节律相关蛋白 15 的相互作用。我们的发现得益于两项技术进步。使用单分子Förster 共振能量转移技术,我们直接观察到蓝光照激发时羧基末端延伸约 15 Å 的位移。结合结构预测和溶液 X 射线散射方法,我们提出了黑暗和光照条件下全长隐花色素的合理结构。这些结构为隐花色素的光活性构象变化和下游调节功能提供了分子基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2de9/9579160/279abfd4d75b/42003_2022_4054_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2de9/9579160/fbc897d3f428/42003_2022_4054_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2de9/9579160/279abfd4d75b/42003_2022_4054_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2de9/9579160/fbc897d3f428/42003_2022_4054_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2de9/9579160/279abfd4d75b/42003_2022_4054_Fig3_HTML.jpg

相似文献

1
Direct experimental observation of blue-light-induced conformational change and intermolecular interactions of cryptochrome.直接实验观察隐花色素的蓝光诱导构象变化和分子间相互作用。
Commun Biol. 2022 Oct 18;5(1):1103. doi: 10.1038/s42003-022-04054-9.
2
Role of structural plasticity in signal transduction by the cryptochrome blue-light photoreceptor.隐花色素蓝光光感受器信号转导中结构可塑性的作用。
Biochemistry. 2005 Mar 15;44(10):3795-805. doi: 10.1021/bi047545g.
3
The Potorous CPD photolyase rescues a cryptochrome-deficient mammalian circadian clock.袋熊 CPD 光解酶拯救了缺乏隐花色素的哺乳动物生物钟。
PLoS One. 2011;6(8):e23447. doi: 10.1371/journal.pone.0023447. Epub 2011 Aug 16.
4
Light-Induced Conformational Changes in the Plant Cryptochrome Photolyase Homology Region Resolved by Selective Isotope Labeling and Infrared Spectroscopy.利用选择性同位素标记和红外光谱技术解析植物隐花色素光解酶同源区的光诱导构象变化。
Photochem Photobiol. 2017 May;93(3):881-887. doi: 10.1111/php.12750.
5
The cryptochrome-photolyase protein family in diatoms.硅藻中的隐花色素-光解酶蛋白家族。
J Plant Physiol. 2017 Oct;217:15-19. doi: 10.1016/j.jplph.2017.06.015. Epub 2017 Jul 8.
6
The Photolyase/Cryptochrome Family of Proteins as DNA Repair Enzymes and Transcriptional Repressors.光解酶/隐花色素蛋白家族作为 DNA 修复酶和转录阻遏物。
Photochem Photobiol. 2017 Jan;93(1):93-103. doi: 10.1111/php.12669. Epub 2017 Jan 9.
7
Photolyase/cryptochrome blue-light photoreceptors use photon energy to repair DNA and reset the circadian clock.光解酶/隐花色素蓝光光感受器利用光子能量修复DNA并重置生物钟。
Oncogene. 2002 Dec 16;21(58):9043-56. doi: 10.1038/sj.onc.1205958.
8
Evolution of Proteins of the DNA Photolyase/Cryptochrome Family.DNA 光解酶/隐花色素家族蛋白的进化。
Biochemistry (Mosc). 2020 Jan;85(Suppl 1):S131-S153. doi: 10.1134/S0006297920140072.
9
Blue-light-induced changes in Arabidopsis cryptochrome 1 probed by FTIR difference spectroscopy.通过傅里叶变换红外差示光谱法探测蓝光诱导的拟南芥隐花色素1的变化
Biochemistry. 2006 Feb 28;45(8):2472-9. doi: 10.1021/bi051964b.
10
Structure function analysis of mammalian cryptochromes.哺乳动物隐花色素的结构功能分析
Cold Spring Harb Symp Quant Biol. 2007;72:133-9. doi: 10.1101/sqb.2007.72.066.

引用本文的文献

1
Capturing structural intermediates in an animal-like cryptochrome photoreceptor by time-resolved crystallography.通过时间分辨晶体学捕获类动物隐花色素光感受器中的结构中间体。
Sci Adv. 2025 May 16;11(20):eadu7247. doi: 10.1126/sciadv.adu7247.
2
Dynamics and mechanism of DNA repair by a bifunctional cryptochrome.一种双功能隐花色素进行DNA修复的动力学及机制
Proc Natl Acad Sci U S A. 2024 Dec 10;121(50):e2417633121. doi: 10.1073/pnas.2417633121. Epub 2024 Dec 2.
3
A structural decryption of cryptochromes.隐花色素的结构解密

本文引用的文献

1
Magnetic sensitivity of cryptochrome 4 from a migratory songbird.一种候鸟隐花色素4的磁敏感性
Nature. 2021 Jun;594(7864):535-540. doi: 10.1038/s41586-021-03618-9. Epub 2021 Jun 23.
2
Tuning flavin environment to detect and control light-induced conformational switching in Drosophila cryptochrome.调节黄素环境以检测和控制果蝇隐花色素中的光诱导构象转换。
Commun Biol. 2021 Feb 26;4(1):249. doi: 10.1038/s42003-021-01766-2.
3
Structural insights into photoactivation of plant Cryptochrome-2.植物隐花色素2光激活的结构解析
Front Chem. 2024 Aug 16;12:1436322. doi: 10.3389/fchem.2024.1436322. eCollection 2024.
4
'Seeing' the electromagnetic spectrum: spotlight on the cryptochrome photocycle.“看见”电磁光谱:隐花色素光循环聚焦
Front Plant Sci. 2024 Mar 1;15:1340304. doi: 10.3389/fpls.2024.1340304. eCollection 2024.
5
A deazariboflavin chromophore kinetically stabilizes reduced FAD state in a bifunctional cryptochrome.一个去氮黄素生色团在双功能隐花色素中动力学稳定还原型 FAD 状态。
Sci Rep. 2023 Oct 4;13(1):16682. doi: 10.1038/s41598-023-43930-0.
Commun Biol. 2021 Jan 4;4(1):28. doi: 10.1038/s42003-020-01531-x.
4
Structural insights into the photoactivation of Arabidopsis CRY2.拟南芥 CRY2 光激活的结构见解
Nat Plants. 2020 Dec;6(12):1432-1438. doi: 10.1038/s41477-020-00800-1. Epub 2020 Nov 16.
5
The human CRY1 tail controls circadian timing by regulating its association with CLOCK:BMAL1.人类 CRY1 尾部通过调节与 CLOCK:BMAL1 的结合来控制生物钟。
Proc Natl Acad Sci U S A. 2020 Nov 10;117(45):27971-27979. doi: 10.1073/pnas.1920653117. Epub 2020 Oct 26.
6
Structural insights into BIC-mediated inactivation of Arabidopsis cryptochrome 2.结构洞察 BIC 介导的拟南芥隐花色素 2 的失活。
Nat Struct Mol Biol. 2020 May;27(5):472-479. doi: 10.1038/s41594-020-0410-z. Epub 2020 May 11.
7
The oligomeric structures of plant cryptochromes.植物隐花色素的寡聚结构。
Nat Struct Mol Biol. 2020 May;27(5):480-488. doi: 10.1038/s41594-020-0420-x. Epub 2020 May 11.
8
Model Reconstruction from Small-Angle X-Ray Scattering Data Using Deep Learning Methods.使用深度学习方法从小角X射线散射数据进行模型重建。
iScience. 2020 Mar 27;23(3):100906. doi: 10.1016/j.isci.2020.100906. Epub 2020 Feb 13.
9
Improved protein structure prediction using predicted interresidue orientations.利用预测的残基间取向改进蛋白质结构预测。
Proc Natl Acad Sci U S A. 2020 Jan 21;117(3):1496-1503. doi: 10.1073/pnas.1914677117. Epub 2020 Jan 2.
10
Chemical and structural analysis of a photoactive vertebrate cryptochrome from pigeon.鸽子光激活隐花色素的化学和结构分析。
Proc Natl Acad Sci U S A. 2019 Sep 24;116(39):19449-19457. doi: 10.1073/pnas.1907875116. Epub 2019 Sep 4.