Zheng Baibing, Song Xingguo, Wang Li, Zhang Yue, Tang Youyong, Wang Shiwen, Li Lei, Wu Yawen, Song Xianrang, Xie Li
Department of Clinical Laboratory, Shandong Cancer Hospital and Institute, Shandong First Medical University and Shandong Academy of Medical Sciences, Jinan, Shandong, China.
School of Medical Laboratory, Weifang Medical University, Weifang, China.
Front Oncol. 2022 Oct 31;12:1037523. doi: 10.3389/fonc.2022.1037523. eCollection 2022.
tRNA derived small RNAs (tRFs) have recently received extensive attention; however, the effects of tRFs in exosome as biomarkers has been less studied. The objective of this study was to validate novel diagnostic exosomal tRFs with sensitivity and specificity for non-small cell lung cancer (NSCLC).
Exosomes extracted from plasma of NSCLC patients and healthy individuals were identified by transmission electron microscopy (TEM), qNano and western blots. The differentially expressed tRFs were screened by high-throughput sequencing in plasma exosomes of NSCLC patients and healthy individuals, and further verified by Quantitative Real-Time PCR (qRT-PCR). To assess the diagnostic efficacy of exosomal tRFs for NSCLC, receiver operating characteristic (ROC) curves were used next.
The expression levels of exosomal tRF-Leu-TAA-005, tRF-Asn-GTT-010, tRF-Ala-AGC-036, tRF-Lys-CTT-049, and tRF-Trp-CCA-057 were significantly decreased in NSCLC patients and early-stage NSCLC patients compared to healthy individuals. Notably, the exepression of tRF-Leu-TAA-005, tRF-Asn-GTT-010, tRF-Ala-AGC-036, tRF-Lys-CTT-049, and tRF-Trp-CCA-057 in the exosomes were higher than the exosome depleted supernatant (EDS).
Our results showed that the levels of exosomal tRF-Leu-TAA-005, tRF-Asn-GTT-010, tRF-Ala-AGC-036, tRF-Lys-CTT-049, and tRF-Trp-CCA-057 were significantly downregulated in NSCLC patients. This suggests that these five exosomal tRFs may be promising diagnostic biomarkers for NSCLC.
转运RNA衍生的小RNA(tRFs)近来受到广泛关注;然而,tRFs作为生物标志物在外泌体中的作用研究较少。本研究的目的是验证对非小细胞肺癌(NSCLC)具有敏感性和特异性的新型诊断性外泌体tRFs。
通过透射电子显微镜(TEM)、qNano和蛋白质免疫印迹法鉴定从NSCLC患者和健康个体血浆中提取的外泌体。通过对NSCLC患者和健康个体血浆外泌体进行高通量测序筛选差异表达的tRFs,并通过定量实时聚合酶链反应(qRT-PCR)进一步验证。接下来使用受试者工作特征(ROC)曲线评估外泌体tRFs对NSCLC的诊断效能。
与健康个体相比,NSCLC患者和早期NSCLC患者中外泌体tRF-Leu-TAA-005、tRF-Asn-GTT-010、tRF-Ala-AGC-036、tRF-Lys-CTT-049和tRF-Trp-CCA-057的表达水平显著降低。值得注意的是,外泌体中tRF-Leu-TAA-005、tRF-Asn-GTT-010、tRF-Ala-AGC-036、tRF-Lys-CTT-049和tRF-Trp-CCA-057的表达高于外泌体去除上清液(EDS)。
我们的结果表明,NSCLC患者中外泌体tRF-Leu-TAA-005、tRF-Asn-GTT-010、tRF-Ala-AGC-036、tRF-Lys-CTT-049和tRF-Trp-CCA-057的水平显著下调。这表明这五种外泌体tRFs可能是有前景的NSCLC诊断生物标志物。