具有胞外还原碘酸盐能力的细菌在全球的分布情况。

Global occurrence of the bacteria with capability for extracellular reduction of iodate.

作者信息

Guo Jinzhi, Jiang Jie, Peng Zhaofeng, Zhong Yuhong, Jiang Yongguang, Jiang Zhou, Hu Yidan, Dong Yiran, Shi Liang

机构信息

Department of Biological Sciences and Technology, School of Environmental Studies, China University of Geosciences, Wuhan, China.

State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, China.

出版信息

Front Microbiol. 2022 Nov 25;13:1070601. doi: 10.3389/fmicb.2022.1070601. eCollection 2022.

Abstract

The γ-proteobacterium MR-1 reduces iodate to iodide extracellularly. Both and gene clusters are involved in extracellular reduction of iodate by MR-1. DmsEFAB reduces iodate to hypoiodous acid and hydrogen peroxide (HO). Subsequently, HO is reduced by MtrCAB to facilitate DmsEFAB-mediated extracellular reduction of iodate. To investigate the distribution of bacteria with the capability for extracellular reduction of iodate, bacterial genomes were systematically searched for both and gene clusters. The and gene clusters were found in three and 26 species. Coexistence of both and gene clusters in these bacteria suggests their potentials for extracellular reduction of iodate. Further analyses demonstrated that these bacteria were isolated from a variety of ecosystems, including the lakes, rivers, and subsurface rocks in East and Southeast Asia, North Africa, and North America. Importantly, most of the bacteria with both and gene clusters were found in different marine environments, which ranged from the Arctic Ocean to Antarctic coastal marine environments as well as from the Atlantic Ocean to the Indian and Pacific Oceans. Widespread distribution of the bacteria with capability for extracellular reduction of iodate around the world suggests their significant importance in global biogeochemical cycling of iodine. The genetic organization of and gene clusters also varied substantially. The identified gene clusters often contained additional genes for multiheme -type cytochromes. The numbers of gene cluster detected in a given bacterial genome ranged from one to six. In latter, duplications of gene clusters occurred. These results suggest different paths for these bacteria to acquire their capability for extracellular reduction of iodate.

摘要

γ-变形菌MR-1可在细胞外将碘酸盐还原为碘化物。DmsEFAB和MtrCAB基因簇均参与MR-1对碘酸盐的细胞外还原过程。DmsEFAB将碘酸盐还原为次碘酸和过氧化氢(H₂O₂)。随后,MtrCAB将H₂O₂还原,以促进DmsEFAB介导的碘酸盐细胞外还原。为了研究具有细胞外还原碘酸盐能力的细菌的分布情况,我们系统地在细菌基因组中搜索DmsEFAB和MtrCAB基因簇。在3个γ-变形菌和26个δ-变形菌物种中发现了DmsEFAB和MtrCAB基因簇。这些细菌中DmsEFAB和MtrCAB基因簇的共存表明它们具有细胞外还原碘酸盐的潜力。进一步分析表明,这些细菌分离自各种生态系统,包括东亚、东南亚、北非和北美的湖泊、河流及地下岩石。重要的是,大多数同时含有DmsEFAB和MtrCAB基因簇的细菌存在于不同的海洋环境中,范围从北冰洋到南极沿海海洋环境,以及从大西洋到印度洋和太平洋。具有细胞外还原碘酸盐能力的细菌在全球广泛分布,这表明它们在全球碘生物地球化学循环中具有重要意义。DmsEFAB和MtrCAB基因簇的遗传组织也有很大差异。已鉴定的DmsEFAB基因簇通常包含额外的多血红素型细胞色素基因。在给定细菌基因组中检测到的DmsEFAB基因簇数量从1到6个不等。在后者中,出现了DmsEFAB基因簇的重复。这些结果表明这些细菌获得细胞外还原碘酸盐能力的途径不同。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6564/9732548/a340f6219ae9/fmicb-13-1070601-g001.jpg

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