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衣阿华诺卡氏菌DSM 45197(=NRRL 5646)的全基因组序列

Complete Genome Sequence of Nocardia iowensis DSM 45197 (= NRRL 5646).

作者信息

Collins Fairclough Aneisha, Spröer Cathrin, Swiderski Jolantha, Bunk Boyke, Lamm Andrew S

机构信息

Natural Products Research Laboratory, Faculty of Science and Sport, University of Technology, Kingston, Jamaica.

Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.

出版信息

Microbiol Resour Announc. 2023 Jan 24;12(1):e0058122. doi: 10.1128/mra.00581-22. Epub 2023 Jan 4.

Abstract

We report the complete genome sequence and predicted functional profile of Nocardia iowensis DSM 45197. N. iowensis DSM 45197 is a spore-forming, mesophilic, Gram-positive bacterium that was isolated from garden soil in Osceola, Iowa, USA. This organism has been exploited for its production of glycocinnamolyspermidine antibiotics and biotransformation of xenobiotic substances. Other significant features of N. iowensis DSM 45197 include the first fully characterized carboxylic acid reductase (CAR) and the first bacterial nitric oxide synthase system. The genome sequence of N. iowensis DSM 45197 can facilitate further understanding of its function, as well as the pathogenesis of spp. N. iowensis DSM 45197 has a genome size of 8.95 Mbp; about 46% of the coding sequences have no known homologues and were labeled hypothetical proteins. This finding implies further potential for biomedical and biotechnological research applications.

摘要

我们报道了衣阿华诺卡氏菌DSM 45197的全基因组序列及预测的功能概况。衣阿华诺卡氏菌DSM 45197是一种形成孢子的嗜温革兰氏阳性细菌,从美国爱荷华州奥西奥拉的花园土壤中分离得到。该菌株因其能产生糖肉桂酰精胺抗生素以及对外源物质进行生物转化而受到关注。衣阿华诺卡氏菌DSM 45197的其他显著特征包括首个得到全面表征的羧酸还原酶(CAR)和首个细菌一氧化氮合酶系统。衣阿华诺卡氏菌DSM 45197的基因组序列有助于进一步了解其功能以及该菌属的致病机制。衣阿华诺卡氏菌DSM 45197的基因组大小为895万碱基对;约46%的编码序列没有已知的同源物,被标记为假定蛋白。这一发现意味着在生物医学和生物技术研究应用方面具有进一步的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1afd/9872661/9edeaa92a5a3/mra.00581-22-f001.jpg

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