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利用计算方法在植物源抗癌药物发现领域的最新进展。

Recent advances in the area of plant-based anti-cancer drug discovery using computational approaches.

机构信息

Bioinformatics Division, ICMR-National Institute of Cancer Prevention and Research, I-7, Sector-39, Noida, Uttar Pradesh, 201301, India.

出版信息

Mol Divers. 2024 Apr;28(2):901-925. doi: 10.1007/s11030-022-10590-7. Epub 2023 Jan 21.

DOI:10.1007/s11030-022-10590-7
PMID:36670282
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9859751/
Abstract

Phytocompounds are a well-established source of drug discovery due to their unique chemical and functional diversities. In the area of cancer therapeutics, several phytocompounds have been used till date to design and develop new drugs. One of the desired interests of pharmaceutical companies and researchers globally is that new anti-cancer leads are discovered, for which phytocompounds can be considered a valuable source. Simultaneously, in recent years, the growth of computational approaches like virtual screening (VS), molecular dynamics (MD), pharmacophore modelling, Quantitative structure-activity relationship (QSAR), Absorption Distribution Metabolism Excretion and Toxicity (ADMET), network biology, and machine learning (ML) has gained importance due to their efficiency, reduced time-consuming nature, and cost-effectiveness. Therefore, the present review amalgamates the information on plant-based molecules identified for cancer lead discovery from in silico approaches. The mandate of this review is to discuss studies published in the last 5-6 years that aim to identify the phytomolecules as leads against cancer with the help of traditional computational approaches as well as newer techniques like network pharmacology and ML. This review also lists the databases and webservers available in the public domain for phytocompounds related information that can be harnessed for drug discovery. It is expected that the present review would be useful to pharmacologists, medicinal chemists, molecular biologists, and other researchers involved in the development of natural products (NPs) into clinically effective lead molecules.

摘要

植物化合物是药物发现的一个成熟来源,因为它们具有独特的化学和功能多样性。在癌症治疗领域,迄今为止,已经有几种植物化合物被用于设计和开发新药。全球制药公司和研究人员的一个理想关注点是发现新的抗癌先导化合物,而植物化合物可以被视为有价值的来源。同时,近年来,虚拟筛选 (VS)、分子动力学 (MD)、药效团建模、定量构效关系 (QSAR)、吸收分布代谢排泄和毒性 (ADMET)、网络生物学和机器学习 (ML) 等计算方法的发展变得越来越重要,因为它们具有效率高、耗时短和成本效益高的特点。因此,本综述综合了从计算方法中发现植物来源的抗癌先导化合物的相关信息。本综述的目的是讨论过去 5-6 年发表的研究,这些研究旨在借助传统计算方法以及网络药理学和机器学习等新技术来鉴定植物分子作为抗癌先导化合物。本综述还列出了公共领域中可用于与植物化合物相关信息的数据库和网络服务器,这些信息可用于药物发现。预计本综述将对药理学家、药物化学家、分子生物学家和其他参与将天然产物 (NPs) 开发为临床有效先导化合物的研究人员有用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3ed2/9859751/1be364f15f6d/11030_2022_10590_Fig8_HTML.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3ed2/9859751/1be364f15f6d/11030_2022_10590_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3ed2/9859751/e51d4ca4985b/11030_2022_10590_Fig1_HTML.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3ed2/9859751/53cc3fe56a04/11030_2022_10590_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3ed2/9859751/3d90413c55a7/11030_2022_10590_Fig6_HTML.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3ed2/9859751/1be364f15f6d/11030_2022_10590_Fig8_HTML.jpg

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