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迭代交叉验证法预测小数据集弥漫性大 B 细胞淋巴瘤的生存情况。

Iterated cross validation method for prediction of survival in diffuse large B-cell lymphoma for small size dataset.

机构信息

Department of Electrical Engineering, I-Shou University, Kaohsiung, 84001, Taiwan.

Department of Nuclear Medicine, Kaohsiung Medical University Hospital, Kaohsiung, 80756, Taiwan.

出版信息

Sci Rep. 2023 Jan 25;13(1):1438. doi: 10.1038/s41598-023-28394-6.

Abstract

Efforts have been made to improve the risk stratification model for patients with diffuse large B-cell lymphoma (DLBCL). This study aimed to evaluate the disease prognosis using machine learning models with iterated cross validation (CV) method. A total of 122 patients with pathologically confirmed DLBCL and receiving rituximab-containing chemotherapy were enrolled. Contributions of clinical, laboratory, and metabolic imaging parameters from fluorine-18 fluorodeoxyglucose (FDG) positron emission tomography/computed tomography (PET/CT) scans to the prognosis were evaluated using five regression models, namely logistic regression, random forest, support vector classifier (SVC), deep neural network (DNN), and fuzzy neural network models. Binary classification predictions for 3-year progression free survival (PFS) and 3-year overall survival (OS) were conducted. The 10-iterated fivefold CV with shuffling process was conducted to predict the capability of learning machines. The median PFS and OS were 41.0 and 43.6 months, respectively. Two indicators were found to be independent predictors for prognosis: international prognostic index and total metabolic tumor volume (MTVsum) from FDG PET/CT. For PFS, SVC and DNN (both with accuracy 71%) have the best predictive results, of which outperformed other algorithms. For OS, the DNN has the best predictive result (accuracy 76%). Using clinical and metabolic parameters as input variables, the machine learning methods with iterated CV method add the predictive values for PFS and OS evaluation in DLBCL patients.

摘要

人们努力改进弥漫性大 B 细胞淋巴瘤 (DLBCL) 患者的风险分层模型。本研究旨在使用迭代交叉验证 (CV) 方法的机器学习模型评估疾病预后。共纳入 122 例经病理证实且接受含利妥昔单抗化疗的 DLBCL 患者。使用逻辑回归、随机森林、支持向量分类器 (SVC)、深度神经网络 (DNN) 和模糊神经网络模型评估氟-18 氟代脱氧葡萄糖 (FDG) 正电子发射断层扫描/计算机断层扫描 (PET/CT) 扫描的临床、实验室和代谢成像参数对预后的贡献。对 3 年无进展生存 (PFS) 和 3 年总生存 (OS) 进行了二元分类预测。采用 10 次迭代五重 CV 加洗牌过程来预测学习机器的能力。中位 PFS 和 OS 分别为 41.0 和 43.6 个月。国际预后指数和 FDG PET/CT 的总代谢肿瘤体积 (MTVsum) 是两个独立的预后预测指标。对于 PFS,SVC 和 DNN(准确率均为 71%)具有最佳的预测结果,优于其他算法。对于 OS,DNN 具有最佳的预测结果(准确率为 76%)。使用临床和代谢参数作为输入变量,迭代 CV 方法的机器学习方法可提高 DLBCL 患者 PFS 和 OS 评估的预测值。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e5ae/9876907/89e172061bfb/41598_2023_28394_Fig1_HTML.jpg

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