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实验设计筛选表明,新型诺维梭菌孢子发芽感应对缬氨酸及其类似物具有立体选择性。

A design of experiments screen reveals that Clostridium novyi-NT spore germinant sensing is stereoflexible for valine and its analogs.

机构信息

Temasek Life Sciences Laboratory, Singapore, Singapore.

Department of Biological Sciences, National University of Singapore, Singapore, Singapore.

出版信息

Commun Biol. 2023 Jan 28;6(1):118. doi: 10.1038/s42003-023-04496-9.

DOI:10.1038/s42003-023-04496-9
PMID:36709236
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9884283/
Abstract

Although Clostridium novyi-NT is an anti-cancer bacterial therapeutic which germinates within hypoxic tumors to kill cancer cells, the actual germination triggers for C. novyi-NT are still unknown. In this study, we screen candidate germinants using combinatorial experimental designs and discover by serendipity that D-valine is a potent germinant, inducing 50% spore germination at 4.2 mM concentration. Further investigation revealed that five D-valine analogs are also germinants and four of these analogs are enantiomeric pairs. This stereoflexible effect of L- and D-amino acids shows that spore germination is a complex process where enantiomeric interactions can be confounders. This study also identifies L-cysteine as a germinant, and hypoxanthine and inosine as co-germinants. Several other amino acids promote (L-valine, L-histidine, L-threonine and L-alanine) or inhibit (L-arginine, L-glycine, L-lysine, L-tryptophan) germination in an interaction-dependent manner. D-alanine inhibits all germination, even in complex growth media. This work lays the foundation for improving the germination efficacy of C. novyi-NT spores in tumors.

摘要

虽然梭菌 C. novyi-NT 是一种抗肿瘤的细菌治疗药物,它在缺氧肿瘤中发芽以杀死癌细胞,但 C. novyi-NT 的实际发芽触发因素仍不清楚。在这项研究中,我们使用组合实验设计筛选候选发芽剂,并偶然发现 D-缬氨酸是一种有效的发芽剂,在 4.2mM 浓度下诱导 50%的孢子发芽。进一步的研究表明,五种 D-缬氨酸类似物也是发芽剂,其中四种是对映异构体对。L-和 D-氨基酸的这种立体灵活性表明,孢子发芽是一个复杂的过程,其中对映体相互作用可能是混杂因素。这项研究还确定 L-半胱氨酸是一种发芽剂,次黄嘌呤和肌苷是共同发芽剂。其他几种氨基酸以相互依赖的方式促进(L-缬氨酸、L-组氨酸、L-苏氨酸和 L-丙氨酸)或抑制(L-精氨酸、L-甘氨酸、L-赖氨酸、L-色氨酸)发芽。D-丙氨酸抑制所有的发芽,即使在复杂的生长培养基中也是如此。这项工作为提高 C. novyi-NT 孢子在肿瘤中的发芽效果奠定了基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0b77/9884283/b8d9a6d4392e/42003_2023_4496_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0b77/9884283/545517a2aecd/42003_2023_4496_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0b77/9884283/101620e54643/42003_2023_4496_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0b77/9884283/888ef04e113a/42003_2023_4496_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0b77/9884283/47a645634455/42003_2023_4496_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0b77/9884283/3539319ba21c/42003_2023_4496_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0b77/9884283/b8d9a6d4392e/42003_2023_4496_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0b77/9884283/545517a2aecd/42003_2023_4496_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0b77/9884283/101620e54643/42003_2023_4496_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0b77/9884283/888ef04e113a/42003_2023_4496_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0b77/9884283/47a645634455/42003_2023_4496_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0b77/9884283/3539319ba21c/42003_2023_4496_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0b77/9884283/b8d9a6d4392e/42003_2023_4496_Fig6_HTML.jpg

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