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在全身γ射线照射的新西兰白兔中鉴定辐射反应性红细胞膜相关蛋白(RMAPs)。

Identification of radiation responsive RBC membrane associated proteins (RMAPs) in whole-body γ-irradiated New Zealand white rabbits.

作者信息

Purkayastha Jubilee, Grover Priyanka, Mukherjee Prabuddho, Kumar Kamendra, Chandna Sudhir

机构信息

Department of Molecular and Radiation Biosciences (MARB), Institute of Nuclear Medicine and Allied Sciences (INMAS), Defence Research and Development Organisation (DRDO), Brig SK Majumdar Marg, Timarpur, Delhi 110054, India.

Department of Oncology, Lombardi Comprehensive Cancer Center, Georgetown University Medical Center, Washington-DC, United States.

出版信息

Biotechnol Rep (Amst). 2023 Jan 18;37:e00783. doi: 10.1016/j.btre.2023.e00783. eCollection 2023 Mar.

Abstract

This study is aimed to identify radiation-responsive RBC Membrane Associated Proteins (RMAPs) in Rabbits . Male New Zealand White rabbits were exposed to a single acute total body γ-radiation dose of 2 Gy at a dose rate of 0.746 Gy/min. Following this, at early time points of 6 h till the 7 d, RMAPs were collected and analyzed by MALDI-TOF-MS. Bioinformatics analysis was conducted to explore the biological functions of these proteins. Based on fold change, radiation responsiveness, GO, pathway enrichment, and hub position in the PPI network, we identified seven RMAPs as potential biomarker candidates viz., PVALB, PRKCB, GPD1, CP2G1, CSNK2B, ATP1B1, TPI1. As per KEGG enrichment, most of the proteins were implicated in cellular radiation response, oxidative damage, DNA repair, apoptosis, immune response, and cell signaling. This study forms the foundation for RMAPs-based Proteomic strategies for high throughput radiation bio-dosimetry for triage in the case of a radiological/nuclear incident.

摘要

本研究旨在鉴定兔子体内的辐射反应性红细胞膜相关蛋白(RMAPs)。雄性新西兰白兔接受单次急性全身γ辐射剂量2 Gy,剂量率为0.746 Gy/min。此后,在6小时至7天的早期时间点收集RMAPs,并通过基质辅助激光解吸电离飞行时间质谱(MALDI-TOF-MS)进行分析。进行生物信息学分析以探索这些蛋白质的生物学功能。基于倍数变化、辐射反应性、基因本体(GO)、通路富集以及蛋白质-蛋白质相互作用(PPI)网络中的枢纽位置,我们鉴定出七种RMAPs作为潜在的生物标志物候选物,即小白蛋白(PVALB)、蛋白激酶Cβ(PRKCB)、甘油-3-磷酸脱氢酶1(GPD1)、CP2G1、酪蛋白激酶2β(CSNK2B)、ATP酶Na+/K+转运亚基β1(ATP1B1)、磷酸丙糖异构酶1(TPI1)。根据京都基因与基因组百科全书(KEGG)富集分析,大多数蛋白质参与细胞辐射反应、氧化损伤、DNA修复、细胞凋亡、免疫反应和细胞信号传导。本研究为基于RMAPs的蛋白质组学策略奠定了基础,该策略可用于在放射性/核事件中进行高通量辐射生物剂量测定以进行伤员分类。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc13/9883204/df331cfbd75d/gr1.jpg

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