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自私的细菌在海洋水柱中普遍存在。

Selfish bacteria are active throughout the water column of the ocean.

作者信息

Giljan Greta, Brown Sarah, Lloyd C Chad, Ghobrial Sherif, Amann Rudolf, Arnosti Carol

机构信息

Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Bremen, Germany.

Environment, Ecology, and Energy Program, University of North Carolina-Chapel Hill, Chapel Hill, NC, USA.

出版信息

ISME Commun. 2023 Feb 4;3(1):11. doi: 10.1038/s43705-023-00219-7.

Abstract

Heterotrophic bacteria in the ocean invest carbon, nitrogen, and energy in extracellular enzymes to hydrolyze large substrates to smaller sizes suitable for uptake. Since hydrolysis products produced outside of a cell may be lost to diffusion, the return on this investment is uncertain. Selfish bacteria change the odds in their favor by binding, partially hydrolyzing, and transporting polysaccharides into the periplasmic space without loss of hydrolysis products. We expected selfish bacteria to be most common in the upper ocean, where phytoplankton produce abundant fresh organic matter, including complex polysaccharides. We, therefore, sampled water in the western North Atlantic Ocean at four depths from three stations differing in physiochemical conditions; these stations and depths also differed considerably in microbial community composition. To our surprise, we found that selfish bacteria are common throughout the water column of the ocean, including at depths greater than 5500 m. Selfish uptake as a strategy thus appears to be geographically-and phylogenetically-widespread. Since processing and uptake of polysaccharides require enzymes that are highly sensitive to substrate structure, the activities of these bacteria might not be reflected by measurements relying on uptake only of low molecular weight substrates. Moreover, even at the bottom of the ocean, the supply of structurally-intact polysaccharides, and therefore the return on enzymatic investment, must be sufficient to maintain these organisms.

摘要

海洋中的异养细菌将碳、氮和能量投入到胞外酶中,以将大的底物水解成适合吸收的较小尺寸。由于在细胞外产生的水解产物可能会因扩散而损失,这种投资的回报是不确定的。自私的细菌通过结合、部分水解并将多糖运输到周质空间而不损失水解产物,从而改变了有利于它们的几率。我们预计自私的细菌在海洋上层最为常见,那里浮游植物产生丰富的新鲜有机物质,包括复杂的多糖。因此,我们在北大西洋西部从三个理化条件不同的站点的四个深度采集了水样;这些站点和深度的微生物群落组成也有很大差异。令我们惊讶的是,我们发现自私的细菌在海洋水柱中普遍存在,包括在深度超过5500米的地方。因此,自私摄取作为一种策略似乎在地理和系统发育上都很普遍。由于多糖的加工和摄取需要对底物结构高度敏感的酶,这些细菌的活性可能无法通过仅依赖低分子量底物摄取的测量来反映。此外,即使在海洋底部,结构完整的多糖的供应以及因此酶投资的回报,也必须足以维持这些生物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2f2b/9899235/3f7f3614260b/43705_2023_219_Fig1_HTML.jpg

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