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心脏手术相关急性肾损伤的机器学习预测模型的开发与验证

Development and Validation of a Machine Learning Predictive Model for Cardiac Surgery-Associated Acute Kidney Injury.

作者信息

Li Qian, Lv Hong, Chen Yuye, Shen Jingjia, Shi Jia, Zhou Chenghui

机构信息

State Key Laboratory of Cardiovascular Disease, National Center for Cardiovascular Diseases, Department of Anesthesiology, Fuwai Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, 167 Beilishi Rd., Xicheng District, Beijing 100037, China.

出版信息

J Clin Med. 2023 Feb 1;12(3):1166. doi: 10.3390/jcm12031166.

Abstract

OBJECTIVE

We aimed to develop and validate a predictive machine learning (ML) model for cardiac surgery associated with acute kidney injury (CSA-AKI) based on a multicenter randomized control trial (RCT) and a Medical Information Mart for Intensive Care-IV (MIMIC-IV) dataset.

METHODS

This was a subanalysis from a completed RCT approved by the Ethics Committee of Fuwai Hospital in Beijing, China (NCT03782350). Data from Fuwai Hospital were randomly assigned, with 80% for the training dataset and 20% for the testing dataset. The data from three other centers were used for the external validation dataset. Furthermore, the MIMIC-IV dataset was also utilized to validate the performance of the predictive model. The area under the receiver operating characteristic curve (ROC-AUC), the precision-recall curve (PR-AUC), and the calibration brier score were applied to evaluate the performance of the traditional logistic regression (LR) and eleven ML algorithms. Additionally, the Shapley Additive Explanations (SHAP) interpreter was used to explain the potential risk factors for CSA-AKI.

RESULT

A total of 6495 eligible patients undergoing cardiopulmonary bypass (CPB) were eventually included in this study, 2416 of whom were from Fuwai Hospital (Beijing), for model development, 562 from three other cardiac centers in China, and 3517 from the MIMICIV dataset, were used, respectively, for external validation. The CatBoostClassifier algorithms outperformed other models, with excellent discrimination and calibration performance for the development, as well as the MIMIC-IV, datasets. In addition, the CatBoostClassifier achieved ROC-AUCs of 0.85, 0.67, and 0.77 and brier scores of 0.14, 0.19, and 0.16 in the testing, external, and MIMIC-IV datasets, respectively. Moreover, the utmost important risk factor, the N-terminal brain sodium peptide (NT-proBNP), was confirmed by the LASSO method in the feature section process. Notably, the SHAP explainer identified that the preoperative blood urea nitrogen level, prothrombin time, serum creatinine level, total bilirubin level, and age were positively correlated with CSA-AKI; preoperative platelets level, systolic and diastolic blood pressure, albumin level, and body weight were negatively associated with CSA-AKI.

CONCLUSIONS

The CatBoostClassifier algorithms outperformed other ML models in the discrimination and calibration of CSA-AKI prediction cardiac surgery with CPB, based on a multicenter RCT and MIMIC-IV dataset. Moreover, the preoperative NT-proBNP level was confirmed to be strongly related to CSA-AKI.

摘要

目的

我们旨在基于一项多中心随机对照试验(RCT)和重症监护医学信息集市-IV(MIMIC-IV)数据集,开发并验证一种用于预测心脏手术相关急性肾损伤(CSA-AKI)的机器学习(ML)模型。

方法

这是一项来自中国北京阜外医院伦理委员会批准的已完成RCT的亚分析(NCT03782350)。阜外医院的数据被随机分配,80%用于训练数据集,20%用于测试数据集。来自其他三个中心的数据用于外部验证数据集。此外,MIMIC-IV数据集也用于验证预测模型的性能。应用受试者操作特征曲线下面积(ROC-AUC)、精确召回率曲线(PR-AUC)和校准布里尔评分来评估传统逻辑回归(LR)和十一种ML算法的性能。此外,使用夏普利值附加解释(SHAP)解释器来解释CSA-AKI的潜在风险因素。

结果

本研究最终纳入了6495例接受体外循环(CPB)的符合条件的患者,其中2416例来自阜外医院(北京)用于模型开发,562例来自中国其他三个心脏中心,3517例来自MIMIC-IV数据集,分别用于外部验证。CatBoostClassifier算法优于其他模型,在开发数据集以及MIMIC-IV数据集中具有出色的区分度和校准性能。此外,CatBoostClassifier在测试、外部和MIMIC-IV数据集中的ROC-AUC分别为0.85、0.67和0.77,布里尔评分分别为0.14、0.19和0.16。此外,在特征选择过程中通过LASSO方法确认了最重要的风险因素,即N末端脑钠肽(NT-proBNP)。值得注意的是,SHAP解释器确定术前血尿素氮水平、凝血酶原时间、血清肌酐水平、总胆红素水平和年龄与CSA-AKI呈正相关;术前血小板水平、收缩压和舒张压、白蛋白水平和体重与CSA-AKI呈负相关。

结论

基于多中心RCT和MIMIC-IV数据集,在CPB心脏手术的CSA-AKI预测的区分度和校准方面,CatBoostClassifier算法优于其他ML模型。此外,术前NT-proBNP水平被证实与CSA-AKI密切相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/438c/9917969/92a0bd90f8d7/jcm-12-01166-g001.jpg

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