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禽流感H7N9病毒在哺乳动物体内复制和传播过程中受到随机过程的进化限制。

Avian H7N9 influenza viruses are evolutionarily constrained by stochastic processes during replication and transmission in mammals.

作者信息

Braun Katarina M, Haddock Iii Luis A, Crooks Chelsea M, Barry Gabrielle L, Lalli Joseph, Neumann Gabriele, Watanabe Tokiko, Imai Masaki, Yamayoshi Seiya, Ito Mutsumi, Moncla Louise H, Koelle Katia, Kawaoka Yoshihiro, Friedrich Thomas C

机构信息

AIDS Vaccine Research Institute, Department of Pathobiological Sciences, University of Wisconsin-Madison, 585 Science Dr. Madison, WI 53711, USA.

Department of Genetics, University of Wisconsin-Madison, 425 Henry Mall Madison, WI 53706, US.

出版信息

Virus Evol. 2023 Jan 19;9(1):vead004. doi: 10.1093/ve/vead004. eCollection 2023.

Abstract

H7N9 avian influenza viruses (AIVs) have caused over 1,500 documented human infections since emerging in 2013. Although wild-type H7N9 AIVs can be transmitted by respiratory droplets in ferrets, they have not yet caused widespread outbreaks in humans. Previous studies have revealed molecular determinants of H7N9 AIV host switching, but little is known about potential evolutionary constraints on this process. Here, we compare patterns of sequence evolution for H7N9 AIV and mammalian H1N1 viruses during replication and transmission in ferrets. We show that three main factors-purifying selection, stochasticity, and very narrow transmission bottlenecks-combine to severely constrain the ability of H7N9 AIV to effectively adapt to mammalian hosts in isolated, acute spillover events. We find rare evidence of natural selection favoring new, potentially mammal-adapting mutations within ferrets but no evidence of natural selection acting during transmission. We conclude that human-adapted H7N9 viruses are unlikely to emerge during typical spillover infections. Our findings are instead consistent with a model in which the emergence of a human-transmissible virus would be a rare and unpredictable, though highly consequential, 'jackpot' event. Strategies to control the total number of spillover infections will limit opportunities for the virus to win this evolutionary lottery.

摘要

自2013年出现以来,H7N9禽流感病毒(AIV)已导致1500多例有记录的人类感染病例。尽管野生型H7N9 AIV可通过雪貂的呼吸道飞沫传播,但尚未在人类中引起广泛暴发。先前的研究已经揭示了H7N9 AIV宿主转换的分子决定因素,但对于这一过程潜在的进化限制知之甚少。在此,我们比较了H7N9 AIV和哺乳动物H1N1病毒在雪貂体内复制和传播过程中的序列进化模式。我们发现,纯化选择、随机性和非常狭窄的传播瓶颈这三个主要因素共同作用,严重限制了H7N9 AIV在孤立的急性溢出事件中有效适应哺乳动物宿主的能力。我们发现了罕见的证据,表明自然选择有利于雪貂体内新的、可能适应哺乳动物的突变,但没有证据表明在传播过程中存在自然选择。我们得出结论,在典型的溢出感染过程中,不太可能出现适应人类的H7N9病毒。相反,我们的研究结果与一种模型一致,即人类可传播病毒的出现将是一个罕见且不可预测的、尽管后果极其严重的“头奖”事件。控制溢出感染总数的策略将限制病毒赢得这场进化彩票的机会。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26a1/9939568/7fdd4b3a073a/vead004f1.jpg

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