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用于布氏嗜脂蚓田间检测的环境环介导等温扩增(eLAMP)诊断工具的研制。

Development of environmental loop-mediated isothermal amplification (eLAMP) diagnostic tool for Bulinus truncatus field detection.

机构信息

Hosts Pathogens Environment Interactions, UMR 5244, CNRS, IFREMER, UM, University of Perpignan, Via Domitia, 66860, Perpignan, France.

SAS ParaDev®, 66860, Perpignan, France.

出版信息

Parasit Vectors. 2023 Feb 28;16(1):78. doi: 10.1186/s13071-023-05705-4.

Abstract

BACKGROUND

Global changes are reshaping the distribution of vector-borne diseases by spreading vectors to previously non-endemic areas. Since 2013, urogenital schistosomiasis has emerged in Corsica and threatens European countries. Gastropod vectors release schistosome larvae that can infect humans who come into contact with freshwater bodies. Monitoring schistosomiasis host vectors is a prerequisite to understand and subsequently to control this pathogen transmission. Because malacological surveys are time consuming and require special expertise, the use of a simple molecular method is desirable.

METHODS

The aim of this study is to develop a ready-to-use protocol using the LAMP (loop-mediated isothermal amplification) method to detect environmental DNA of Bulinus truncatus, vector of Schistosoma haematobium. Interestingly, LAMP method possesses all the characteristics required for adaptability to field conditions particularly in low-income countries: speed, simplicity, lyophilized reagents, low cost and robustness against DNA amplification inhibitors. We have tested this new method on Corsican water samples previously analysed by qPCR and ddPCR.

RESULTS

We demonstrate that our diagnostic tool B. truncatus eLAMP (Bt-eLAMP) can detect the eDNA of Bulinus truncatus as effectively as the two other methods. Bt-eLAMP can even detect 1/4 of positive samples not detectable by qPCR. Moreover, the complete Bt-eLAMP protocol (sampling, sample pre-process, amplification and revelation) does not require sophisticated equipment and can be done in 1 ½ h.

CONCLUSIONS

LAMP detection of environmental DNA provides large-scale sensitive surveillance of urogenital schistosomiasis possible by identifying potentially threatened areas. More generally, eLAMP method has great potential in vector-borne diseases and ecology.

摘要

背景

全球变化通过将病媒传播到以前非流行地区,正在重塑媒介传播疾病的分布。自 2013 年以来,泌尿生殖道血吸虫病已在科西嘉出现,并威胁到欧洲国家。腹足类病媒释放的血吸虫幼虫可感染接触淡水体的人类。监测血吸虫病宿主病媒是了解和随后控制这种病原体传播的前提。由于贝类调查既费时又需要专业知识,因此希望使用简单的分子方法。

方法

本研究的目的是开发一种使用环介导等温扩增 (LAMP) 方法检测 Bulinus truncatus 环境 DNA 的即用型方案,Bulinus truncatus 是 Schistosoma haematobium 的载体。有趣的是,LAMP 方法具有适应现场条件的所有特征,特别是在低收入国家:速度、简单性、冻干试剂、低成本和对 DNA 扩增抑制剂的稳健性。我们已经在以前通过 qPCR 和 ddPCR 分析过的科西嘉水样上测试了这种新方法。

结果

我们证明我们的诊断工具 B. truncatus eLAMP (Bt-eLAMP) 可以像其他两种方法一样有效地检测 Bulinus truncatus 的 eDNA。Bt-eLAMP 甚至可以检测到 qPCR 无法检测到的 1/4 阳性样本。此外,完整的 Bt-eLAMP 方案(采样、样品预处理、扩增和揭示)不需要复杂的设备,并且可以在 1 个半小时内完成。

结论

环境 DNA 的 LAMP 检测通过识别潜在受威胁地区,为泌尿生殖道血吸虫病提供了大规模敏感监测的可能性。更一般地说,eLAMP 方法在虫媒传播疾病和生态学中具有巨大的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e3a6/9972625/930a17fe575d/13071_2023_5705_Figa_HTML.jpg

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