Archaeal Biology Center, Institute for Advanced Study, Shenzhen University, Shenzhen, Guangdong, China.
Laboratory of Optoelectronic Devices and Systems of Ministry of Education and Guangdong Province, College of Optoelectronic Engineering, Shenzhen University, Shenzhen, China.
Antonie Van Leeuwenhoek. 2023 Jun;116(6):499-510. doi: 10.1007/s10482-023-01820-5. Epub 2023 Mar 14.
"Psychrodesulfovibrio", a proposed genus within the family Desulfovibrionaceae, is a group of sulfate-reducing bacteria with biogeochemical significance but restricted child taxa availability. In this study, a strictly anaerobic bacterium, designed strain FT415, was isolated from mangrove sediments in Futian Mangrove Nature Reserve in Shenzhen, China. The strain was Gram-stain-negative, motile, and vibrio-shaped with a single polar flagellum, which grew at the temperature range of 15-42 °C (optimum 37 °C), pH range of 6.0-7.5 (optimum 6.8), and in the presence of 0-36 g l NaCl (optimum 6 g l NaCl). In the presence of sulfate, electron donors including lactate, ethanol, pyruvate, malate, fumarate, succinate, cysteine, and glycerol were incompletely oxidized to acetate, and H and formate were used as electron donors with acetate as the carbon source by strain FT415. Sulfate, thiosulfate, sulfide, and anthraquinone-2,6-disulfonate were reduced in the presence of lactate. Fe(III) oxide was reduced without cell growth. Fermentative growth was observed with pyruvate and cysteine. Vitamins were not required for growth. The major cellular fatty acids (> 10%) were C, summed feature 10 (C c11/t9/t6 and/or unknown ECL 17.834), C cis 9, and C. The major polar lipids were phosphatidylethanolamine, phospholipids, and aminolipids. The predominant menaquinone was MK-6(H). The genomic DNA G+C content was 56.7%. Phylogenetic analysis showed that strain FT415 shared a 98.1% similarity in 16S rRNA gene sequence, an average nucleotide identity value of 84.0%, an average amino-acid identity value of 85.4%, and a digital DNA-DNA hybridization value of 25.7% with its closest relative Desulfovibrio subterraneus HN2, which has been proposed to be transferred to the genus "Psychrodesulfovibrio". Based on phenotypic, phylogenetic, and genotypic evidence, a new species of the family Desulfovibrionaceae, Desulfovibrio mangrovi sp. nov. was proposed with the type strain FT415 (=GDMCC 1.3410=KCTC 25525).
“Psychrodesulfovibrio”,是脱硫弧菌科中的一个提议属,是一群具有生物地球化学意义但分类群可用性有限的硫酸盐还原菌。在本研究中,从中国深圳福田红树林自然保护区的红树林沉积物中分离到了一株严格厌氧细菌,设计菌株 FT415。该菌株革兰氏阴性,运动,呈弧菌状,有一个单极鞭毛,在 15-42°C(最佳 37°C)的温度范围、6.0-7.5(最佳 6.8)的 pH 值范围和 0-36 g l NaCl(最佳 6 g l NaCl)存在下生长。在硫酸盐存在的情况下,电子供体包括乳酸盐、乙醇、丙酮酸盐、苹果酸盐、富马酸盐、琥珀酸盐、半胱氨酸和甘油,不完全氧化为乙酸盐,并且 H 和甲酸盐被用作电子供体,乙酸盐为碳源。在存在乳酸盐的情况下,硫酸盐、硫代硫酸盐、硫化物和蒽醌-2,6-二磺酸盐被还原。在没有细胞生长的情况下还原三价铁氧化物。观察到丙酮酸和半胱氨酸的发酵生长。生长不需要维生素。主要细胞脂肪酸(>10%)为 C、总和特征 10(C c11/t9/t6 和/或未知 ECL 17.834)、C 顺 9 和 C。主要极性脂类为磷脂酰乙醇胺、磷脂和氨基脂类。主要的menaquinone 是 MK-6(H)。基因组 DNA G+C 含量为 56.7%。系统发育分析表明,菌株 FT415 在 16S rRNA 基因序列上的相似性为 98.1%,平均核苷酸同一性值为 84.0%,平均氨基酸同一性值为 85.4%,数字 DNA-DNA 杂交值为 25.7%与最近的亲缘关系 Desulfovibrio subterraneus HN2 相似,该菌已被提议转移到“Psychrodesulfovibrio”属。基于表型、系统发育和基因型证据,提出了脱硫弧菌科的一个新种,即红树林脱硫弧菌 sp. nov.,其模式菌株为 FT415(=GDMCC 1.3410=KCTC 25525)。