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临床相关曲线结构的分割与分类方法综述。

Segmentation and Classification Approaches of Clinically Relevant Curvilinear Structures: A Review.

机构信息

Department of Biomedical Engineering, Manipal Institute of Technology, Manipal Academy of Higher Education, Manipal, 576104, Karnataka, India.

Manipal School of Information Sciences, Manipal Academy of Higher Education, Manipal, 576104, Karnataka, India.

出版信息

J Med Syst. 2023 Mar 27;47(1):40. doi: 10.1007/s10916-023-01927-2.

DOI:10.1007/s10916-023-01927-2
PMID:36971852
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10042761/
Abstract

Detection of curvilinear structures from microscopic images, which help the clinicians to make an unambiguous diagnosis is assuming paramount importance in recent clinical practice. Appearance and size of dermatophytic hyphae, keratitic fungi, corneal and retinal vessels vary widely making their automated detection cumbersome. Automated deep learning methods, endowed with superior self-learning capacity, have superseded the traditional machine learning methods, especially in complex images with challenging background. Automatic feature learning ability using large input data with better generalization and recognition capability, but devoid of human interference and excessive pre-processing, is highly beneficial in the above context. Varied attempts have been made by researchers to overcome challenges such as thin vessels, bifurcations and obstructive lesions in retinal vessel detection as revealed through several publications reviewed here. Revelations of diabetic neuropathic complications such as tortuosity, changes in the density and angles of the corneal fibers have been successfully sorted in many publications reviewed here. Since artifacts complicate the images and affect the quality of analysis, methods addressing these challenges have been described. Traditional and deep learning methods, that have been adapted and published between 2015 and 2021 covering retinal vessels, corneal nerves and filamentous fungi have been summarized in this review. We find several novel and meritorious ideas and techniques being put to use in the case of retinal vessel segmentation and classification, which by way of cross-domain adaptation can be utilized in the case of corneal and filamentous fungi also, making suitable adaptations to the challenges to be addressed.

摘要

从微观图像中检测曲线结构,这有助于临床医生做出明确的诊断,这在最近的临床实践中变得至关重要。真菌丝、角状真菌、角膜和视网膜血管的外观和大小差异很大,使得它们的自动检测变得很麻烦。具有卓越自我学习能力的自动化深度学习方法已经取代了传统的机器学习方法,尤其是在具有挑战性背景的复杂图像中。使用大量输入数据进行自动特征学习,具有更好的泛化和识别能力,但没有人为干扰和过度的预处理,在上述情况下非常有益。正如这里回顾的几篇出版物所揭示的那样,研究人员已经做出了各种尝试来克服视网膜血管检测中的细血管、分支和阻塞性病变等挑战。这里回顾的许多出版物都成功地对糖尿病神经病变并发症(如弯曲、角膜纤维密度和角度的变化)进行了分类。由于伪影使图像变得复杂并影响分析质量,因此已经描述了处理这些挑战的方法。传统和深度学习方法已经在 2015 年至 2021 年之间进行了调整和发布,涵盖了视网膜血管、角膜神经和丝状真菌,在本综述中进行了总结。我们发现了一些新颖而有价值的想法和技术,用于视网膜血管分割和分类,通过跨域自适应,也可以用于角膜和丝状真菌的情况,针对要解决的挑战进行适当的调整。

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Automated detection of superficial fungal infections from microscopic images through a regional convolutional neural network.通过区域卷积神经网络从微观图像中自动检测浅表真菌感染。
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