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基于基因组的粘细菌硫内酯化合物索拉菌素的发现。

Genome-Guided Discovery of the Myxobacterial Thiolactone-Containing Sorangibactins.

机构信息

Department of Microbial Natural Products, Helmholtz-Institute for Pharmaceutical Research Saarland (HIPS), Helmholtz Centre for Infection Research (HZI) and Department of Pharmacy at Saarland University, Campus E8.1, 66123 Saarbrücken, Germany.

Helmholtz International Lab for Anti-Infectives, Campus E8.1, 66123 Saarbrücken, Germany.

出版信息

ACS Chem Biol. 2023 Apr 21;18(4):924-932. doi: 10.1021/acschembio.3c00063. Epub 2023 Apr 4.

Abstract

In this study, an unprecedented myxobacterial siderophore termed sorangibactin was discovered by heterologous expression of a coelibactin-like nonribosomal peptide synthetase (NRPS) gene cluster from the strain MSr11367 in the host DK1622. De novo structure elucidation uncovered a linear polycyclic structure consisting of an N-terminal phenol group, an oxazole, tandem -methyl-thiazolidines, and an unusual C-terminal γ-thiolactone moiety. Except for the unprecedented oxazoline dehydrogenation to form an oxazole, which we show to be catalyzed by a cytochrome P450-dependent enzyme, other tailoring steps were found necessary for efficient downstream processing. The unusual thioesterase (TE) domain is proposed to select homocysteine or methionine for offloading involving an intramolecular γ-thiolactone formation. Its active site comprises a rare cysteine, which was found essential for product formation by point mutation to alanine or serine, which both abolished its activity. This unusual release mechanism and the resulting rare thiolactone structure can serve as a starting point for detailed biochemical investigations.

摘要

在这项研究中,通过在宿主 DK1622 中异源表达来自 菌株 MSr11367 的类似于 coelibactin 的非核糖体肽合成酶 (NRPS) 基因簇,发现了一种前所未有的粘细菌铁载体,称为 sorangibactin。从头结构阐明揭示了一种由 N 端酚基团、一个噁唑、串联 -甲基-噻唑烷和一个不寻常的 C 端 γ-硫内酯部分组成的线性多环结构。除了我们证明由细胞色素 P450 依赖性酶催化的前所未有的噁唑啉脱氢形成噁唑外,其他修饰步骤对于有效下游处理是必需的。提议不寻常的硫酯酶 (TE) 结构域选择高半胱氨酸或蛋氨酸进行卸载,涉及分子内 γ-硫内酯形成。其活性位点包含一个罕见的半胱氨酸,通过点突变将其突变为丙氨酸或丝氨酸,这两种突变都使其活性丧失,这对半胱氨酸至关重要。这种不寻常的释放机制和由此产生的罕见硫内酯结构可以作为详细生化研究的起点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f356/10127202/04877fe38b4f/cb3c00063_0002.jpg

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